Sinorhizobium medicae: Smed_1174
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Entry
Smed_1174 CDS
T00555
Name
(GenBank) protein-export membrane protein SecD
KO
K12257
SecD/SecF fusion protein
Organism
smd
Sinorhizobium medicae
Pathway
smd02024
Quorum sensing
smd03060
Protein export
smd03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
Smed_1174
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Smed_1174
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Smed_1174
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
smd02044
]
Smed_1174
Secretion system [BR:
smd02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
Smed_1174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
Sec_GG
SecD_1st
MMPL
ACR_tran
SecD-TM1
GHMP_kinases_C
Motif
Other DBs
NCBI-ProteinID:
ABR60025
UniProt:
A6U8P5
LinkDB
All DBs
Position
1251265..1253841
Genome browser
AA seq
858 aa
AA seq
DB search
MPRFSPFKNILIWLVVLAGFACALPNLLSREQLADWPTWLPHRQVPLGLDLSGGSHIVLQ
VNREDIVAERLHSTIDAIADALRQADIHYTGLSGSGRSLQFRLRDGTKAPAAREALKALS
APVQQDGLFGKSIQELVYEESATNDTLRLRLTDEGIDFRVSAAVARSVEVVRRRVGEVIA
VAPSIERRENDRLSVQVPGLDEPQRLKDLLAQRGDVALRWLDLSMPAQQAVDTRPPAASE
VLYSLDDPPIPYLVERRAFAAAPDFVEAQPGFDPATAEPVVDVRIAAGATERIAPILQSD
PRKQFAIVLDGQVISTSVLDSAVSGDAVRISGNLSEDGANDLAALIRAGPLPVSLTVIEE
RTVGPEDGADAVANGLTAGLIAALAVAACMIGFYGFFGLVAVVAVIVNVVLIIAVLSVTG
ATLTLPGIAGIILTIGIAVDSNVLIYERLREEARSSDKPLRRALDDGFERVLRSIVDSNL
TIFIAGVILLSLGSGAFSGFAVTLAVGSLTTILTAHSLTRRLIRGWYRRRRPHRLPRGIR
TGFFSRADFRFMAIRNPVFILMTALSLASLVLLTSLGLNMGADFRGGSVIELRARTGVAD
RADIRARLDELNLGEVQIEELGSARDVLIRIPSQEAGDNAEQTAVGLVRAELEDQYDFRR
VAVVGPGVSGELTRAGSLALAAAVLSVLLYVWLRFGRRFALGAVVATLHDVLLTLGFLGL
TGIEFNLASIAALLTIVCYSLSDTMVIYDRVRENLVRYRRMPLSVLIDTSINQTLSRTVL
TSLTTMLALVALYLFGGSVLVQTFSATLIFGVLVGTVSSIYVAGPLLILFNRRNSRLGGT
EDPNNPDSPSKTEAKGAV
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgcccaggttttcgccgttcaagaacattctgatttggctggtcgtcctggcgggcttt
gcctgtgcgctgccaaatcttctttccagggagcagcttgccgattggccgacatggctg
ccgcaccggcaggtaccgctcggcctcgatctcagtggcggctctcatattgtcctgcag
gtcaaccgcgaagacatcgttgcggagcgcctgcattcaacgatcgatgccatcgccgat
gcgttgaggcaggcggatatccactatacgggtctgtcaggtagcgggcggagcctgcag
tttcgtctccgcgacggaacgaaggcgcctgccgcgcgtgaggcgttgaaggctttgtcc
gctcccgttcagcaggacggcctctttgggaagtccatccaggaattggtctacgaagaa
agcgcgaccaacgacacgcttcggcttcgcctgaccgacgaaggcatcgacttcagggtc
tccgccgcggttgcccgttccgtcgaggtcgtgcgccggcgcgtcggcgaggtcatcgca
gttgcaccatcgatagagcgtcgggaaaatgaccgcctcagcgtgcaggtgcccggtttg
gacgagccgcaaaggctcaaagatcttcttgcccagcggggcgacgtcgctctgaggtgg
ctggacctgtcgatgccggcacagcaggccgtcgacaccaggccgccggcagcttccgag
gtcctctattcgctcgacgatccacccatcccctacctcgtggagcgacgagccttcgct
gcagcaccggacttcgtcgaggcacagccgggcttcgaccccgcaacggccgaacctgtc
gtagatgtaaggatcgcggcgggcgcaaccgagcggattgctccgatcctgcagtcggat
ccaaggaagcagtttgcgatcgtactcgacgggcaggtcatctcgacctccgttctggac
agcgccgtctctggtgatgccgtccggatttccggaaatctctcggaagatggtgccaac
gatctcgccgctttgatccgtgccggtccgcttcccgtttcgctgaccgtcatcgaggaa
cgtactgtcggcccggaggacggggccgacgcagttgcaaacggcctcacggccggcctg
atcgccgcccttgcggtcgcggcctgtatgatcggcttttacggcttcttcggcctcgtc
gcagtcgtcgccgtcatcgtcaacgtcgtactgataatcgcggtattgtccgtcaccggc
gccacgctgaccttgcccggaattgccgggattatcctcacgatcggaattgcggtcgac
tcgaacgttctcatctacgagcgtctcagggaagaggcacgcagcagtgacaagccgttg
cgacgggcgctggacgatggcttcgaacgcgtcttgagaagcatcgtcgactcgaacctt
acgatattcatcgcgggcgttatcctgctctctctcggctccggcgccttcagcgggttt
gcggtcacgcttgccgtcggcagccttaccaccattctaaccgcgcacagcctgacgcgc
cggcttatccgcggctggtatcgccgtcgtcggccgcaccggctgccacggggcattcgg
acgggatttttcagtcgggcagacttccgtttcatggcgatccgtaatccggttttcatt
ttgatgacagctttgtcgcttgcttcgctggtcctcctgacaagcctcgggctcaacatg
ggagcagatttcagaggtggctccgttatcgagctgcgggcgcgaaccggggtggctgac
cgtgccgacatccgtgcccgcctcgacgaactgaacctcggagaggttcaaatcgaggaa
cttggttcggcgcgagacgttctcatccgtatcccctcgcaggaagcgggcgacaatgcc
gagcagacggcagttggtctcgttcgcgcagagctcgaggatcagtatgacttccggcgt
gtcgcggtggtcggtcccggcgtttccggggagctgacgcgggcaggatcgcttgctctt
gctgctgcggtgctgagcgttctgctttatgtctggcttcgtttcggccggcgatttgcg
ttaggagccgttgtcgcgaccttgcacgatgtgctgctgaccctcggattccttgggctg
acaggcattgaattcaatctcgccagcattgcggcgctgctgacgatcgtgtgctattcg
ctgagcgataccatggtgatttatgatcgagttcgggaaaatctggtgcgctatcgaagg
atgccgctttcagtcctgatcgacacgtcgatcaatcagaccctctcgcgaaccgttctg
acgtccttgacgacgatgcttgctctcgtcgcgctctatctgttcgggggcagcgttctt
gttcagaccttcagtgcgacgctcatattcggcgtacttgtgggcacagtctcttcgatc
tatgtcgccggaccgctgctcattctcttcaaccgccgaaacagtcggcttggtggcacg
gaggacccgaacaatccggattcgccgtcgaagacagaagcaaagggtgccgtctga
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