KEGG   Sinorhizobium medicae: Smed_1426
Entry
Smed_1426         CDS       T00555                                 
Name
(GenBank) Ku family containing protein
  KO
K10979  DNA end-binding protein Ku
Organism
smd  Sinorhizobium medicae
Pathway
smd03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:smd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    Smed_1426
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:smd03400]
    Smed_1426
DNA repair and recombination proteins [BR:smd03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     Smed_1426
SSDB
Motif
Pfam: Ku
Other DBs
NCBI-ProteinID: ABR60272
UniProt: A6U9E2
LinkDB
Position
1508358..1509242
AA seq 294 aa
MAVAARALWKGYVRFGEVTAPVALYTATSTSERISFHTVNKETGNRVRREFVDSATGKPV
EKEDQVKGYELDNDRYVVLDPEEVASAVPESDKTLRVQAFITCDDIEKVYFDKPYYLTPD
KMGTEAYALLRDGMQKKNVAAIAQTVLFRRMRTVLLRAHDKGLIATTLNFDYEVRSAKEA
FKDIPDIKIEGEMLELAKHIIGTKKGTFSADEFDDRYEAALAELIKAKLEGKALPKRAAP
KVSKANDLLEALRQSAGMKKPPAASKKRTGKAAAAEGKKKAAEEGAPAQRRRAG
NT seq 885 nt   +upstreamnt  +downstreamnt
atggcagtcgctgcacgagccctgtggaagggctacgttcggttcggcgaagtgaccgcc
ccagtggcgctctacaccgccacctcgacttccgagcggatctctttccacacggtgaac
aaggaaacgggcaaccgtgtacggcgagagttcgtcgacagcgcgaccggcaagccggta
gagaaagaagaccaggtcaagggttacgagctcgacaacgacagatacgtcgtcctcgat
ccggaggaagttgcctctgcagtgcccgagagcgacaaaacgcttcgagtacaggcattc
atcacctgtgacgacatcgaaaaggtctatttcgacaagccctattacctgaccccggac
aaaatgggcaccgaggcctatgcacttttgcgggacggcatgcagaagaagaatgtcgcg
gcgatcgcgcagacagtgctcttccgccgaatgcgcacagtgttgctgcgcgcgcacgac
aaagggctgatcgccaccacactcaacttcgactatgaggtcagaagcgccaaagaagcc
ttcaaggacattccggacattaagattgaaggcgagatgctggaactcgcaaagcacatc
ataggcacgaagaaggggacattctcggccgacgagttcgacgaccgctatgaagccgcg
ctcgccgagctgatcaaagcgaagctggaaggcaaggccctgccgaagcgcgctgccccg
aaagtctcgaaagcaaacgatctgctggaggcgctacgccagagtgcgggcatgaaaaag
ccgccggcagcgtcgaagaagcgtaccggcaaggcagcagcggctgaaggcaagaaaaag
gcggctgaggagggcgcacctgcccagcgtcgccgcgcaggttaa

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