Sinorhizobium medicae: Smed_1426
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Entry
Smed_1426 CDS
T00555
Name
(GenBank) Ku family containing protein
KO
K10979
DNA end-binding protein Ku
Organism
smd
Sinorhizobium medicae
Pathway
smd03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
Smed_1426
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smd03400
]
Smed_1426
DNA repair and recombination proteins [BR:
smd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
Smed_1426
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
ABR60272
UniProt:
A6U9E2
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All DBs
Position
1508358..1509242
Genome browser
AA seq
294 aa
AA seq
DB search
MAVAARALWKGYVRFGEVTAPVALYTATSTSERISFHTVNKETGNRVRREFVDSATGKPV
EKEDQVKGYELDNDRYVVLDPEEVASAVPESDKTLRVQAFITCDDIEKVYFDKPYYLTPD
KMGTEAYALLRDGMQKKNVAAIAQTVLFRRMRTVLLRAHDKGLIATTLNFDYEVRSAKEA
FKDIPDIKIEGEMLELAKHIIGTKKGTFSADEFDDRYEAALAELIKAKLEGKALPKRAAP
KVSKANDLLEALRQSAGMKKPPAASKKRTGKAAAAEGKKKAAEEGAPAQRRRAG
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcgctgcacgagccctgtggaagggctacgttcggttcggcgaagtgaccgcc
ccagtggcgctctacaccgccacctcgacttccgagcggatctctttccacacggtgaac
aaggaaacgggcaaccgtgtacggcgagagttcgtcgacagcgcgaccggcaagccggta
gagaaagaagaccaggtcaagggttacgagctcgacaacgacagatacgtcgtcctcgat
ccggaggaagttgcctctgcagtgcccgagagcgacaaaacgcttcgagtacaggcattc
atcacctgtgacgacatcgaaaaggtctatttcgacaagccctattacctgaccccggac
aaaatgggcaccgaggcctatgcacttttgcgggacggcatgcagaagaagaatgtcgcg
gcgatcgcgcagacagtgctcttccgccgaatgcgcacagtgttgctgcgcgcgcacgac
aaagggctgatcgccaccacactcaacttcgactatgaggtcagaagcgccaaagaagcc
ttcaaggacattccggacattaagattgaaggcgagatgctggaactcgcaaagcacatc
ataggcacgaagaaggggacattctcggccgacgagttcgacgaccgctatgaagccgcg
ctcgccgagctgatcaaagcgaagctggaaggcaaggccctgccgaagcgcgctgccccg
aaagtctcgaaagcaaacgatctgctggaggcgctacgccagagtgcgggcatgaaaaag
ccgccggcagcgtcgaagaagcgtaccggcaaggcagcagcggctgaaggcaagaaaaag
gcggctgaggagggcgcacctgcccagcgtcgccgcgcaggttaa
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