Sinorhizobium medicae: Smed_1443
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Entry
Smed_1443 CDS
T00555
Name
(GenBank) TRAP C4-dicarboxylate transport system permease DctM subunit
KO
K21393
TRAP-type transport system permease protein
Organism
smd
Sinorhizobium medicae
Pathway
smd02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Smed_1443
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smd02000
]
Smed_1443
Transporters [BR:
smd02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Smed_1443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctM
DctQ
Motif
Other DBs
NCBI-ProteinID:
ABR60289
UniProt:
A6U9F9
LinkDB
All DBs
Position
complement(1523785..1525653)
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AA seq
622 aa
AA seq
DB search
MTTTTEGVSEFAVLAETMEARPGSRLMRPVEALSAVLLLAIIAMLLSGVVFRYGLSRPIV
WIDEAASIAFLWLAMLGSAIAIDRCEHLRLTIFLNALGERARQFTETLGMVAIMAFLLVL
LPAAYMYASGEMDITSSALNIPAGYRAAAIAVGMVLMVLLAVAQLLRTARALDVAVAVAA
VAAVASALWLLSPALTSFGNGNILIFLVGGAAVCLAMGVPIAFCFGIATLLFLAFTTSMP
LVVMIGRMDEGMSSLILLSVPVFVLLGCILDATGMGKAIVDFLASMLGHVKAGMSYVLLG
SLFLVSGISGSKVSDMATVAPALFPEMKRRGHKPKEMIALLATGAAMADTVPPSIVLIVL
GSVAGVSIAALFTSGFAIALVLLVALAALARIKAARENVDGVIRPSLKRIGATALIAAPA
LVLPFIIRSAVASGAATATEVSTIAVVYAFIIGTVLYGGIGIRRTYKMLVETAAMSGAIL
LILGTAAAMAWALTQTGFAFELTDMMSGLPGGWFTFMLVSIALFMLLGCVLEGLPAIVLL
APIMFPIARAMGIHDVHYSMVIVTAMNVGLMAPPIGIGFYIACKIGNVSPDEAMGAIWPY
IGAMVLGLLLIAAVPWFSLALL
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccacgacggagggcgtttccgaattcgccgtgctcgccgaaacgatggaggcc
cgaccgggttcgcggctgatgcgcccggtcgaagcgctgtctgccgttctgcttctggcc
attatcgccatgctgctttccggcgtggtctttcgctatggtctatccagaccgatcgtc
tggatagacgaagcggcgtcgattgccttcctgtggctggccatgctcggatcggcgatc
gcgatcgaccgttgtgagcacctgcggctgaccatctttctcaatgctctcggtgaacgg
gcccgacagttcaccgagacgctcggcatggtggcgatcatggcattccttctcgtcttg
ctgcctgccgcctatatgtatgcctccggggaaatggacatcacctcgtcggcgttgaac
attcctgccggttatcgcgccgcggcgattgccgtcggcatggttctgatggtgttgctg
gccgtggcgcaattgctcagaaccgcgagggcgctggacgtagcggtggcggtcgcggcc
gttgccgccgtagcatcggcgctctggctgctttcgccggcacttacatcgttcggcaat
ggcaacattctgatttttctcgtcggcggcgccgccgtctgcctcgcaatgggcgttccg
atcgcattttgcttcggcatcgcgacgcttctattccttgccttcacgacatcgatgccg
ctggtcgtcatgatcggccgtatggacgagggaatgtccagtctcatcctgctgtcggtc
ccggtcttcgtgctcctcggttgcattctggacgcgaccggcatggggaaggcgatcgtc
gattttcttgcgtccatgctcggccacgtgaaggccggcatgtcatatgttctgctgggg
tcgctctttctggtatccggcatatctggatcgaaggtctcggacatggcaacggtcgcc
ccggcactgtttcccgagatgaagcggcgcggtcacaaaccgaaggagatgatagcactt
ctggcgaccggcgcggccatggccgataccgtaccgccgagcatcgtgctgatcgtgctc
ggctccgtggcaggcgtctcgatagcggcgctgttcaccagcggtttcgccatcgctctc
gtgttgcttgtcgcgctcgccgcgcttgcccgcatcaaggcggcccgcgaaaatgtcgat
ggcgtcatacgcccgtcgctgaaacgcatcggcgccacggccctgatcgctgcgccggct
ctggtgttgccgttcatcatccgcagcgcggtcgcgagcggagcggcgactgcgacggag
gtctcgaccatcgcagtggtctacgcctttatcataggcactgtgctctatggtggcatc
ggtattcggcgaacctataagatgctggtcgagacggccgcgatgagcggtgcgatcctt
ctgattctcggtaccgccgcggcaatggcctgggcgctcacccagaccgggttcgccttc
gagctcaccgacatgatgagcggcctgccgggcggatggttcacattcatgttggtatcg
atcgccttgttcatgctgctcggctgcgtgctcgaaggcctcccggcaatcgtcctccta
gcgcccatcatgttcccgatcgcgcgtgcgatgggcatccatgacgtccactattccatg
gtcatcgtcactgccatgaatgtcggactgatggcgccgccgatcggcataggcttctac
attgcctgcaagatcggcaacgtctcgcccgacgaggcaatgggtgcgatttggccttac
atcggcgcgatggtgcttggccttttgctgatcgccgccgttccctggttctcgctcgca
ttgctgtga
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