Sinorhizobium medicae: Smed_1538
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Entry
Smed_1538 CDS
T00555
Name
(GenBank) chemotaxis sensory transducer
Organism
smd
Sinorhizobium medicae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Apolipoprotein
Baculo_PEP_C
ApoLp-III
Motif
Other DBs
NCBI-ProteinID:
ABR60380
UniProt:
A6U9Q0
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Position
1623967..1630125
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AA seq
2052 aa
AA seq
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MATKKTNESIDEKAFEALEAALKIDFDDLKSALNDEVSPSEPEAKASEPGKQAAGSGEAR
AARPQQDSQTQPRGTEAPRSFASEMAPKQPPLAPANDDTRKSPAATLRSLEVRSSRAAIR
VAALVSLIWTAAALGVAHLLYAPEIWQIRSLGDLAAMPGVIGVLLGIALPVMLFFSFAIM
IARAQELRSAARSMAEVAMRLAEPETNAADRVMTVGQAVRREVSAMNEGIERTIARATEL
EALVHSEVSALERSYSDNELRVRTLVQELGLEREAIIGHSERIRTAIAGAHTKLKDDLET
ASEDIASRIAVSGEAFASLIDTRAAALTDKSDHALENLSTMLSTRTDALLSGLTTAGVAL
SSEFDSRLDALSENLTQRGEQLLSQFETRASTLDANTEKLNAALNERARQLNETLIARTR
DLNESIRIGQQAISGGLDDVLSSLNTALDEKGASFRQSLKSSADDAIMDLDLRGGFFEEK
LQTTVGHLATAFDERFHEFASAFDKRASQLDTKLMESLHRINETVSGGSEAIGGALDSSV
EKINSALSDQSLTLATALGATQDFIEETIGSRTNELSSLIGNAHNRIESVLSDKTGSLMG
ALTEAQDRIENGFGKRADALAEALTTSEQRLTDGLDSRTSAFIDGLQSAHARIEQTLTGS
TDEITSAIAASQHRLDNTLSERTAALSGALASGASVIENAVGGTADRLERVLSERGRTIT
DVLSTQTTALDEVLAERATQINSTMSARASEMADSLSRHAEDVADSLTFRAMAVAETMTD
RVGEIENKLSQSVSEVAENLGGRVSLIAGTLTDTSARIAEDLSSRVGRISETLAGTSAEI
AEALTARTSEATASLAGKAAEIEQTLTGRAEHLRDTLTTTHDQIRSTLDDRIRAINVSVG
QGREQLEELLSDQSMAMATTLATSASMLEMSIEERQAAIAGAIERGTEALAARASEATAA
LAGKANEIDQTLSGKTAQLRDALASTHEQLRTTLDDRISAIDLSVGQGRERLEEILSDQS
VAMATTLATSASMLEMSLEERQASIAGAIDRSAEALDSRMRSTTGEIAERLAETADQISL
AADSLTNRVDISISGVNSRLDETGARIETSLGSLEERIRSSVGDVDAVLGDTGARIETSL
GSLEERIRDSVGSVNAIVDNAGQRIAESLGERAGEIDRISETAATRISTAIEAGAGRIEE
RLGTMDRALNIGLENVNRTIEGKAAALVTSLRGAVSDATQEIDAEAARSAGLLSKAGADF
AGALAASNAEFASSIEQTASVTAARHAEIARSVTEAAETATARLASTNSQIASHAKSIQQ
SLTEAEKSLDARGQSIRSTLDESTRELNSMLAGRSIELSRLLDEQARPVIEQYAATGKEA
AERIATLTQESADRLRAENAALINAITERTGETLDAISMRAEETAKAMKMVENRLQSTAM
GLIDQLASSNSAIASVIDQASGNLGDMDQRLEATAAKVSETARQASDMLSTSTRLIEGKV
DKLSDISSSTLSQIGGIVGRFEDHSKVLGQASDLLAAAQSNLVSTLEERQDALRTLSVGL
VQRSEEIERTMRALEGFVDGAFQRAEERSGQVAGNLRSGIQSSFADVGRLLSNTEQRATE
AAEALRDTLVKASDEAAASVEGVFTQAEERSRQIADRLRSGVETSFADANKTLSQVEGRA
LSASEALRQVVAKTGEEAGQALEGAFATVEERAKDAASRLRGSIGASVSDVERMLTESGK
KSDGVAVQLREAVRQAIEDAIGRFNGATDDIRRSAGEIRKELDMTREELKRGAFDLPEEA
KENAALMRRAVGEQIKALQELSEIIGKSSSQLEIAQPVRQQEAPVAPVRPAPQAAAPQPP
AAQPAPNAALRGSLGIEQATRPLQPARPPATEERAEEGGGWMRDLLRAASREEEPAAARP
RATDGQPVAKAGDSRNPRHVVESLNSLSVDIARAIDHDASVDLWRRYQRGERDVFTRRLY
TLKGQQTFDEIKRKYDREPEFRTAVDRYIADFEKLLADVARNDPDKRITQTYLTSDTGKV
YTMLAHAAGRFS
NT seq
6159 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgaagaagaccaacgagtcgatcgacgaaaaggcgttcgaggcgctggaagcg
gccttgaagatcgactttgacgacctgaagtcggcattgaacgacgaggtttctccgagc
gagccggaagcaaaagcgtccgagcccgggaagcaggctgccggctccggtgaggcccgc
gccgcacgcccgcaacaagattctcagacgcaaccacgcggcacggaagcaccgcgcagc
tttgcgagcgagatggcgccgaagcagccccccttggcgcccgccaacgacgacacgcgc
aagtcccctgccgcaacgctgcgctcgctcgaggtccgctccagccgtgcggcgatacgc
gtcgctgcgctcgtgtccttaatctggaccgcagccgcgctcggtgttgcccaccttctt
tatgcgccggagatctggcagatccgctctctcggcgatctggcagcgatgcccggtgtg
attggcgtcctgcttggcatcgccctgcccgtcatgctcttcttctccttcgcgatcatg
atcgcgcgagcccaggaactgcgcagcgcagcgcgctccatggctgaggtcgcgatgcgg
ctcgctgaaccggagaccaatgccgcggaccgcgtcatgacggtcggccaggccgtgcgc
cgcgaagtctctgcgatgaacgagggcatagagcgcaccatagcccgggcaaccgaactc
gaagcgcttgtgcattcggaagtcagcgcactcgagcgcagctacagcgataacgagctg
cgggtccgcacgctcgtccaggagcttggtctcgagcgcgaagcgatcatcggccattct
gagcgcatccgaacggcaatcgcaggtgcgcacaccaagctgaaagacgacctggagacg
gcaagcgaggacattgcctcgcgcatcgccgtttccggcgaagccttcgcttcactcata
gacacccgcgccgcagcacttacggacaaatcggatcatgcgctcgaaaacctgagcacg
atgctgagcacccggaccgacgcgctgctctcgggcctgacgactgctggagtggccctc
agcagcgaattcgactcgcgcctggacgcactcagcgaaaatctcacgcagcgcggcgag
cagctgctcagccagttcgaaacccgcgcctcgacgctcgacgccaacaccgagaagctc
aacgccgcgctgaacgaacgcgcccgtcagctcaacgaaacactgatcgcccggacgcgt
gacctcaatgagagcatcaggataggccagcaggctatctccggcggcctcgatgacgtg
ctttcttcgctcaacaccgcacttgatgaaaagggtgcgagcttccgccagagcctcaaa
tcgagcgccgacgacgcgatcatggatctcgatctgcgcggcggcttcttcgaggagaag
ctgcagaccacggtcggccatctggcaaccgctttcgacgaacgcttccacgaatttgca
agcgccttcgacaagcgcgccagccagctcgacacgaagctcatggaaagtctccaccgt
atcaacgagacggtatccggcggctcggaggctatcggcggcgcactcgacagcagtgtg
gaaaagatcaactcggcgctttccgaccagtcgctgaccttggcaacggcgctcggtgcg
acacaagatttcatcgaggagacgatcggcagccgcaccaacgaactcagcagcctgatc
ggcaacgcgcacaaccgcatcgagagcgtcctatcggacaagaccggttcgctgatggga
gccctgaccgaagcacaggaccgcatcgaaaacggcttcggcaagcgcgcagatgcgctc
gccgaagcgctgacgacaagcgagcaacgcctgacggatgggctcgactcccgcacgtcc
gccttcatcgatggcttgcagtcggctcacgcccgtatcgaacaaacccttaccggctcc
acggacgagatcacgagtgcgatcgccgcaagccagcatcggctcgacaacacgctttcc
gaacgaaccgcagcgctgtcgggcgccctcgcctcgggagcaagcgtcatcgaaaatgct
gtcggcggcaccgccgatcggctggagcgcgtcctctccgagcgcggccgaacgatcacc
gacgtgctgtccactcagaccacggcactggacgaagtgcttgcggagcgcgcgacgcaa
atcaactccaccatgtcggctcgcgcaagcgaaatggccgactcgctcagccgccacgcg
gaggatgtcgccgatagcctgacgttccgcgccatggcggtcgcagaaaccatgaccgac
cgcgtcggcgagatcgaaaacaagctttcgcagagtgtctccgaagtcgccgaaaacttg
gggggccgggtcagtctgatcgccggcacactcaccgataccagcgcccgtattgccgag
gacctgagcagccgcgtcggaaggatatccgagaccttggcagggaccagcgcggaaatc
gcggaggcgcttaccgcccgcacgtctgaagctacagcgtcgcttgccggaaaagccgcc
gaaatcgaacagacgctgaccggcagggccgaacacctgcgcgatacgctgacgacgaca
cacgaccagatccgctcgacgctcgacgaccggatcagggcgatcaacgtttcagtcgga
caaggccgcgagcagctcgaagaactgctctccgaccagtcgatggcgatggcgacgacg
cttgcgaccagtgccagcatgcttgaaatgtcgatcgaggagcgtcaggccgcaatcgcc
ggggcgatcgagcgcggcaccgaggcgctcgccgcccgcgcatcggaagcgacagcagcg
cttgccggcaaggccaacgagatcgatcagacgctctccggcaagaccgcgcagttgcgc
gatgcattggcgagcacgcatgagcaattgcgcacgactcttgacgaccggatcagtgcg
attgacctttcagtcggccagggccgcgagcgtttggaagaaatcctgtccgatcaatca
gttgcaatggccaccactctggcgaccagcgccagcatgcttgaaatgtcgctcgaggag
cgccaggcatcgatcgccggagcgatcgatcgcagcgccgaagcgctcgactcccggatg
cgctcgacgacgggcgagatagcggagcgacttgccgagacagcagatcagatcagtctc
gcggccgactccctcaccaatcgggtcgacatttcgatcagcggcgtgaacagccggctt
gacgagaccggcgctcggatcgagacaagcctcggatcgctcgaggagcgtattcgctcc
agcgtcggcgacgtcgatgcggtgctcggcgacaccggcgcccgcatcgagacgagcctc
ggctcccttgaagagcgcattcgcgacagcgtcggcagcgtcaatgccattgtcgacaat
gccggccagcggatcgccgaaagtctcggtgaacgcgcgggcgagatcgacaggatcagc
gaaactgcggcaacgcggatatcgacggcgatcgaggccggcgcaggccggatagaagaa
cgtctcggcacgatggatcgcgcgctcaatatcgggttggaaaacgtcaaccgcacgatc
gaagggaaggctgccgcgctcgtcacaagcttgcgcggcgccgtcagcgacgccactcag
gagatcgatgcggaagccgcgcgttcggccgggctgctgtccaaagcgggggctgacttt
gccggcgcgctcgccgcgagcaacgccgaatttgcatcatcgatcgagcaaaccgcttct
gtaacggccgcgcgccatgctgagatcgcccgttcggtcaccgaagcagcggaaaccgcg
accgcccgtctcgcctctacgaacagtcagatcgcaagccatgccaagagcatccagcag
agcctgaccgaagcggagaaatccctggatgcgcgcggccagtccatccgcagcacgctg
gacgaaagcacccgcgagctcaattcgatgctcgccgggcgctcgatcgaactttcgcgc
ctcctcgacgaacaggctcgccccgtcatcgaacaatacgctgctaccggcaaggaggcc
gccgagcgtattgccaccctcacccaggaaagcgccgaccgcttgcgtgccgaaaacgcc
gcgctcatcaacgccatcaccgagcgtaccggcgagacgctcgatgccatctcgatgcgt
gcggaagagaccgccaaggctatgaagatggtcgagaaccggctgcagtcgaccgccatg
ggtctgatcgaccagcttgcgtcaagcaattcggcgatcgcgtcggtgatcgaccaggcg
agcggcaatctcggcgatatggatcagcgcctcgaggcgacagccgcgaaggtttcggag
acggcacgccaagcctctgacatgctttccacctcgacccgcctgatcgaaggcaaggtc
gacaagctgtcggacatttcctcctcgacgctatcgcagatcggcggcatcgtcggccgc
ttcgaagatcattcgaaggttctcggacaggcatccgaccttctggcagccgctcagtcg
aatctcgtcagtacgctcgaagaacgccaggacgcgcttcgcacgctttcggtcggtctc
gtccagcgttcggaagagatcgagcggaccatgcgggctctcgagggcttcgtcgatggg
gccttccagcgtgccgaggagcgctccggccaggtcgccggcaatctgcgcagcggcata
cagtcctccttcgccgatgtggggcggcttctttccaacaccgaacagcgggcaaccgag
gccgccgaagcgcttcgcgacacgcttgtcaaggcaagcgatgaagccgccgcttcggtc
gagggcgtcttcacgcaagcggaggaacgctcacggcagatcgccgacaggctgcgctcc
ggggtcgagacctccttcgccgacgcgaacaagacgttgtcgcaagtcgaaggccgtgca
ctcagcgcctccgaggctctgcggcaggtcgtggcaaagactggcgaggaagccggacag
gcgctcgaaggagcgttcgccaccgtggaggagcgtgccaaggacgcagcttcgcggcta
cgcggcagcatcggagcctccgtctccgacgtcgagcgcatgctgaccgagagcggcaag
aagtccgatggggtcgcggtacaattgcgggaggccgtccgccaggcgatcgaagacgcg
atcggccgcttcaatggcgctaccgacgacatccggcgctctgcgggcgagatccgcaag
gaactcgatatgacccgcgaagagctgaagcggggcgccttcgaccttccggaagaagcc
aaggagaacgcggcactgatgcgccgcgccgtcggcgagcagatcaaggcgttgcaggag
ctgtccgagatcatcggcaagtcgtcctcgcaactcgaaatcgcccaacccgtgcgccag
caggaggcgcctgtcgccccggttcggccggcgccgcaagccgcagcgccgcagcctccg
gcggctcagcccgcaccgaacgcggcactacgcggaagtctgggcattgagcaggccact
cgcccgctgcagcctgcccggccgccggcaacggaggaacgcgccgaagagggcggcggc
tggatgcgcgatctcctacgcgccgcttcccgcgaggaagagcctgcagctgcacggccg
cgggccacggacggccagccggttgcaaaggcaggggacagccgtaacccgcgccacgtc
gtcgagtcgctgaactcgctctcggtagacattgcgcgcgcgatcgaccacgacgcctct
gtcgatctttggcggcgctatcagcgtggcgaacgcgacgtcttcacacgtcgcctctat
acgctgaaggggcagcagaccttcgacgagatcaagcggaagtacgatcgcgaaccggaa
ttccgcaccgcggtcgaccgttacatcgccgacttcgagaagctgctcgccgatgtcgcc
cgcaacgatcccgacaagcgcatcacccagacctatctgacgtccgatacgggcaaggtc
tacaccatgcttgcccatgcagcggggcgcttcagctaa
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