Sinorhizobium medicae: Smed_2137
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Entry
Smed_2137 CDS
T00555
Name
(GenBank) ABC transporter related
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
smd
Sinorhizobium medicae
Pathway
smd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Smed_2137
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smd02000
]
Smed_2137
Transporters [BR:
smd02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Smed_2137
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
ABC_ATPase
SMC_N
AAA
AAA_22
AAA_23
NB-ARC
ORC-CDC6-like
sCache_3_2
AAA_25
nSTAND3
RsgA_GTPase
Rad17
AAA_17
AAA_28
Rop
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ABR60970
UniProt:
A6UBE0
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All DBs
Position
2203783..2204844
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AA seq
353 aa
AA seq
DB search
MAFLQLTNIQKSFGPVQVVHNFDMGIDKGEFVSFLGPSGCGKTTILRMIAGFETPSGGTI
FIDGKDQGALKPNQRNIGMVFQAYALFPNMNVHDNVAFGLKVAGDSKPEIDKRVKQMLGL
IKLEHLADRFPYQLSGGQQQRVALARALAVKPQVLLLDEPLSALDAKIRVSLREEIRQIQ
QQLGITTVFVTHDQEEALSISDRIVVMNAGRADQIGTPFEIYNTPATRFVASFVGTLNII
EGKVADPAIGAVTIGGQQISLSEPITGAKGGDSISLALRPEAGSIAEGARGDTALPGKVV
SRSFLGSVIRTKLRVGEDIISFDMFNDPGMIPPVAGESVTLRFAAKDLLVIRE
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggcattcctgcaactgaccaatattcagaaatctttcggcccggttcaggtcgtgcat
aatttcgacatggggatcgacaagggcgagttcgtttccttcctcggcccatccggctgc
ggcaagacaaccattctgcgcatgatagccggcttcgagacgccttcgggcgggacgatt
ttcatcgacggcaaggaccagggcgcgctgaagcctaaccagcgcaatatcggcatggtg
tttcaggcatatgccctcttcccgaacatgaacgtgcacgacaatgtcgctttcggtctc
aaggttgcgggcgattcgaaaccggagatcgataaacgggtgaagcagatgctcgggctg
atcaagctcgagcatctggcggaccgcttcccctatcaactctccggcggccagcagcag
cgcgtggcacttgcccgagcactggccgtcaagccgcaggtgcttctgctcgacgagccg
ctttccgcacttgacgcgaagattcgcgtttctctgcgcgaggaaattcgtcagattcag
caacagctcggcatcaccaccgtattcgtgacgcacgaccaggaggaagccctgtcgatt
tccgaccggatcgtcgtcatgaatgccggccgcgccgaccagatcggcactccgttcgag
atctacaacaccccggcgacgcgcttcgtcgcctccttcgtcggcacgctcaacatcatc
gagggtaaggtggccgatcccgcaatcggcgcggtcaccatcggcggccagcagatttcg
ctgagcgagccgataacaggggcaaagggcggcgacagcatttcgctggcactcaggccg
gaagcgggctcgatcgccgagggcgcgcggggcgataccgcacttccgggcaaggtcgta
tcgaggagctttctcggctccgtcatccgcaccaagctgcgggtcggcgaggacatcatc
tccttcgatatgttcaatgacccgggcatgataccgcccgttgccggggaaagcgtcacg
cttcgcttcgcggcaaaggacctgctcgtcatccgcgaatag
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