Sinorhizobium medicae: Smed_2168
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Entry
Smed_2168 CDS
T00555
Name
(GenBank) putative periplasmic binding ABC transporter protein
KO
K11069
spermidine/putrescine transport system substrate-binding protein
Organism
smd
Sinorhizobium medicae
Pathway
smd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Smed_2168
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smd02000
]
Smed_2168
Transporters [BR:
smd02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Spermidine/putrescine transporter
Smed_2168
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
SBP_bac_11
DUF807
Motif
Other DBs
NCBI-ProteinID:
ABR61001
UniProt:
A6UBH1
LinkDB
All DBs
Position
2238792..2239952
Genome browser
AA seq
386 aa
AA seq
DB search
MTKWYRENAPITADKLADELMRLKRGSVSRRHFLGVTGLGLATAVLARQPGLFNSTAYAE
DLGTQMSIATWPNYHDPATFEAFTAATGVAVEVNVFGSNEEMLAKLQAGGTGWDLFVPTN
YTISTYVKLGLIDELDLSKLPNYDASTENARFTSEGVVEGKTYAVPKNWGTTGIAVNSDK
IKAPVASWKDFFEIAMTEGDGRAMVHDYQLTTIGNALVSLGFSFNSIKPEELAKAEELLI
KVKPHLYAINSDYQPAMRATDAWMTMCWTNDGAQLNRDMPEIKFVLGKDGGEIWSDFYAI
PKSAANKAAGYALLDYLMAPNSAVKEHIANGAPTTDSRVLKLLPADVTSNKIVYPDEAAL
SPLEFGAAVTLTDPGRAELMARFKSA
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatggtacagagagaatgccccgatcactgcggacaagcttgccgacgagctg
atgcgcctgaagcgcggctccgtttcgcgccgtcatttccttggtgtcaccggcctcggc
ctcgcgaccgccgtcctggcgcgtcagccgggcctgttcaactccaccgcttacgccgaa
gaccttggcacgcagatgtcgatcgcgacctggcccaactatcacgatcccgccaccttc
gaagccttcaccgctgcgacgggcgtcgccgtcgaagtcaatgtcttcggctccaacgag
gaaatgcttgcaaagctccaggccggcggaaccggctgggacctcttcgtgcccacgaac
tacacgatctccacctatgtgaagcttggcctgatcgacgagctcgatctctccaagctg
ccgaactacgatgcctcgacggagaacgcgcgattcaccagcgaaggcgtcgtcgagggc
aagacctatgccgtgccgaagaattggggaacgaccggaattgcggtgaattccgacaag
atcaaggctccggttgcgagctggaaggacttcttcgagatcgcgatgacggaaggcgac
ggccgcgccatggtgcacgactatcagctcaccaccatcggcaatgcgctcgtttccctc
ggtttctccttcaattcgatcaagccggaggagctcgccaaggccgaagagctcctgatc
aaggtcaagccgcatctctacgcgatcaacagcgactatcagccggcgatgcgcgccacc
gatgcatggatgaccatgtgctggaccaatgacggagcgcaattgaaccgcgacatgccg
gagatcaagttcgtcctcggaaaggatggcggcgaaatctggtcggatttctacgcgatc
ccgaagagtgcggcgaacaaggccgccggttacgcgctgctcgattatctgatggccccg
aatagcgcggtcaaggaacacatcgccaacggcgcaccgacgaccgacagccgggttctc
aagctgctgcctgcagacgtcacctcgaacaagatcgtctatccggacgaagcggctctc
agcccactcgaattcggcgctgcggtgacgctcaccgacccgggccgggccgagctgatg
gcgcgcttcaaatcggcttga
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