Sinorhizobium medicae: Smed_2320
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Entry
Smed_2320 CDS
T00555
Name
(GenBank) alpha amylase catalytic region
KO
K01187
alpha-glucosidase [EC:
3.2.1.20
]
Organism
smd
Sinorhizobium medicae
Pathway
smd00052
Galactose metabolism
smd00500
Starch and sucrose metabolism
smd01100
Metabolic pathways
smd01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
Smed_2320
00500 Starch and sucrose metabolism
Smed_2320
Enzymes [BR:
smd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.20 alpha-glucosidase
Smed_2320
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
Malt_amylase_C
DUF3459
Glyco_hydro_42C
SusG_C
Alpha-amylase_C_2
Alpha-amylase_C
hDGE_amylase
Motif
Other DBs
NCBI-ProteinID:
ABR61152
UniProt:
A6UBX2
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Position
complement(2400629..2402272)
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AA seq
547 aa
AA seq
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MAAPSESDDNWWRGAVIYQVYPRSFQDTDGDGMGDLRGVTRRLPHIASLGVDAIWLSPFF
TSPQADMGYDVSDYCDVDPMFGTLDDFDEMMAEAHRLGLKVIIDQVISHTSDRHPWFMES
RSSRTNAKADWYVWADPKPDGTAPNNWLSIFGGPGWEWDGVRRQYYLHNFLSSQPDLNFH
NPEVQEAVLATVRFWLDRGVDGFRLDTANFYFHDRLLRDNPPLVPDPDATSRDAPEVNPY
GMQNHLYDKTQPENIDFLRRFRALLDEYGGRATVGEIGDGSRSLQTVAAYTSGGDKLHMC
YTFDLLGPEFTARHIRRCVESFQATVADGWVCWAFSNHDVMRHVSRFALREADRARVAKL
AISLLATLRGTICLYQGEELGLPEADLAFEELRDPYGIRFWPAFAGRDGCRTPMVWGSEL
KNAGFSDGVPWLPVREGHRTLAVDAQDGVEGSVLEHYRDTLEFRRRRPALVDGDMAFLGT
NQDILVFTREKDGDRLLFVFNLTPEPQTFQLPATLVAEPLPMPGFAPPFADNAITLAALD
VFCGRLR
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcggccccatcggaatcggatgacaactggtggcgcggagcggtcatctatcaggtc
tatccgcgatctttccaggacaccgacggcgacggaatgggtgaccttcgcggcgttacc
cggcggcttccgcatatcgcctcgctcggtgtcgatgccatctggctctcgcctttcttc
acctcgccccaagcggacatgggctatgacgtttcggattattgcgacgtcgatccgatg
ttcggcacgctcgacgatttcgacgagatgatggcggaagcccatcggctgggactcaag
gtgattatcgaccaggtgatctcgcacacatccgaccggcatccctggttcatggagagc
cgttcgagcaggacgaatgccaaggcggactggtatgtatgggccgacccgaaaccggac
ggcacggcgccgaacaactggctttcaatcttcggcggcccgggctgggagtgggatggg
gtccgcaggcaatattacctgcacaatttcctttcgtcgcagcccgatctcaatttccat
aaccctgaagttcaggaagctgtgctggcgacggtccgcttctggctggaccgaggcgtg
gacggtttcaggctcgatacggcgaacttctatttccacgatcggcttttgcgggacaac
ccgccgctggtgccggatccggacgcgacgagccgcgacgcgccagaggtcaatccttac
ggcatgcagaaccacctctatgacaagacgcagccggaaaacatcgatttcctgcgccgg
ttccgggcgctgctcgatgaatatggcggccgcgcgacggtgggcgaaatcggcgacgga
tcacgctcgctgcagacggttgccgcctatacgagtggcggcgacaagctgcacatgtgc
tacacattcgacctgctcggaccggaattcaccgcgcgtcacatccgccgctgcgttgag
agtttccaggcaacggtggccgacggctgggtctgctgggccttttccaatcacgacgtc
atgcgccatgtcagccgctttgcgttgcgcgaggccgaccgtgcgcgcgtggcgaagctc
gcgatttcgttgctggccactctgcggggcaccatctgcctttaccagggggaggaattg
ggattgccggaagccgaccttgccttcgaagaactgcgcgatccatacggaatccgcttc
tggcccgcctttgccggacgcgacggatgccggacgccgatggtatggggaagtgaactg
aagaatgccggcttttccgacggcgttccctggctgccggtgcgcgaagggcaccggacg
ctggcggtggacgcgcaggatggtgtcgagggttccgtgctcgagcactatcgagacacc
cttgaattccgccggaggcggccggcgctcgtcgatggagacatggcgttcctcggcacc
aaccaggatattctggtcttcacgcgggagaaagacggcgatcggctgctgttcgtcttc
aacctgacgccggaaccgcagacgtttcagcttccggcaacgctcgtggccgagccgctg
ccgatgcccggattcgcgccgcctttcgcggacaatgcgatcacgcttgctgcgctcgac
gttttctgcggcaggctgcgttag
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