Sinorhizobium medicae: Smed_2326
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Entry
Smed_2326 CDS
T00555
Name
(GenBank) extracellular solute-binding protein family 5
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
smd
Sinorhizobium medicae
Pathway
smd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Smed_2326
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smd02000
]
Smed_2326
Transporters [BR:
smd02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Smed_2326
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
BES1_N
Motif
Other DBs
NCBI-ProteinID:
ABR61158
UniProt:
A6UBX8
LinkDB
All DBs
Position
complement(2407024..2408664)
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AA seq
546 aa
AA seq
DB search
MMHKLNGRFRILAASAALAMAMGAAQPAFAETPKDTLVEGFAFDDIITMDPGEAFELSTA
EMTSNTYSLLVRLDLNDTSKVVGDLAESWTVSDDGLTYTFKLKPGMKFASGNPITAEDVA
YSFERAVKLDKSPAFILTQFGLTGDNVTEKAKAADPETFVFTVDQPYAPSFVLNCLTATV
ASVVDKKLVLEHVKSVSPSDEYKYDNDFGNEWLKTGYAGSGPFKLREWRANEVVVLERND
NYYGEPAKLARVIYRHMKESSGQRLALEAGDIDVARNLEPGDYDAVGKNADLATASAPKG
TVYYISLNQKNEKLAKPEVQQAFKYLVDYDAIGSTLIKGIGEIHQSFLPKGVLGAVDENP
YTFDVAKAKELLAKAGYPDGFTVTMDVRNTQPVTGIAESFQQTLGQAGVKLEIIPGDGKQ
TLTKYRARNHDMYIGQWGMDYFDPHSNADTFTNNPDNSDEGTNKTLAWRNAWDVPELSKK
TKDALLERDSTKRAEIYKELQKTVLEDSPFVVIFQQTEVAGLRGIVEGFKLGPSFDTNYV
WNVSKE
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgatgcacaagctcaatggacgttttcgaattctcgccgcctcggcggccctcgccatg
gcgatgggcgcggctcagccggccttcgcggaaacgccgaaggacacgctggtcgagggt
ttcgcattcgacgacatcatcaccatggatcccggcgaagccttcgagctttcgaccgcc
gagatgacgagcaatacctacagcctgctcgtgaggctcgatctcaacgatacctccaag
gtcgtaggcgatcttgcggaaagctggacggtctcggatgacggcctgacctatacgttc
aagctcaagccgggaatgaaattcgcatccggcaatccgatcaccgccgaggacgtcgcc
tattcgttcgaacgtgccgtcaagctcgacaagagcccggccttcatcctcacccagttc
ggccttaccggggacaatgtcacggaaaaggcgaaggccgccgacccggagacctttgtt
ttcacggtcgaccagccctacgcgccgagtttcgtcttgaactgtctgaccgcgacggtt
gcttccgtagtcgacaagaagctcgtgctcgaacatgtgaaatccgtgtcgccgagcgac
gagtacaagtatgacaacgacttcggcaatgagtggctgaagaccggttatgccggttcc
ggtccgttcaagctgcgcgagtggcgcgccaatgaagtcgtggtgctggaacgcaacgac
aattattatggcgaaccggcgaaactcgcccgcgtcatctaccgtcacatgaaggaaagc
tcgggtcagcggctcgcgcttgaagccggcgacatcgatgtcgcgcgcaacctcgagccc
ggcgactacgacgcagtcggcaagaatgccgatctggcgacggccagcgccccgaaggga
acggtctactatatcagcctcaatcagaagaacgaaaagctcgcaaaacccgaggtacag
caggcgttcaagtatcttgtcgattacgacgcgattggctcgaccctgatcaagggcatc
ggcgagattcaccagagcttcctgccgaagggtgtgctgggtgccgtcgacgagaacccc
tacaccttcgacgtagccaaggcgaaggaactgctggcgaaggccggctatccggacggc
ttcaccgttacgatggatgtgcgtaatacccagccggtcaccggcattgccgaatccttc
cagcagacgctggggcaggcgggcgtgaagctcgaaattattccaggagacggcaagcag
accctgaccaagtaccgcgcccgcaatcacgacatgtatatcggccagtggggcatggat
tatttcgatccgcactccaatgccgataccttcaccaacaatccggacaattccgacgaa
ggcacgaacaagacgctcgcctggcgcaacgcctgggacgttccggaactcagcaagaag
accaaggacgcgctcctcgaacgcgacagcacaaagcgcgccgagatctacaaggagctg
cagaaaacggtgctcgaggacagtcctttcgtcgtcatcttccagcagacagaggtcgcc
gggttgcgcggcattgtcgagggcttcaagctcgggccgagcttcgacaccaactacgtc
tggaacgtctccaaggaatag
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