Sinorhizobium medicae: Smed_2392
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Entry
Smed_2392 CDS
T00555
Name
(GenBank) Extracellular ligand-binding receptor
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
smd
Sinorhizobium medicae
Pathway
smd02010
ABC transporters
smd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Smed_2392
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Smed_2392
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smd02000
]
Smed_2392
Transporters [BR:
smd02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
Smed_2392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
ANF_receptor
Peripla_BP_5
Fe-ADH
Motif
Other DBs
NCBI-ProteinID:
ABR61224
UniProt:
A6UC44
LinkDB
All DBs
Position
complement(2468208..2469326)
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AA seq
372 aa
AA seq
DB search
MRKSLLSAVALTAMLAFSGTAWAEILVGVGAPLTGPNAAFGAQIQKGAEQAAEDINAAGG
INGEQIRIVLGDDVSDPKQGVSVAQKFVADGVKFVVGHFNSGVSIPASEIYAENGLLQVT
PASTNPQFTERGLWNTFRTCGRDDQQGAVAGAYIAANFKDAKVAVIHDKTPYGQGLADET
KKSMNEAGVTEALYEGINTGDKDFSALIAKMKQAGVSIVYYGGLHTEAGLIMRQMKDQGL
KATLMSGDGIVSNELASIAGDAVDGTLMTFAPDPRKSPAAKDLVEKFRTAGFEPEAYTLY
AYAALQVIAEGAKAAGNSDPQAVAEAIKAKGPFKTAIGELGFDEKGDITRPDYVMYTWKK
GDDGKFSYFQNE
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgagaaagtctcttctgtcggccgttgcgctgacagcaatgctcgccttcagcggcacc
gcatgggctgagatcctggtcggcgtcggagctccgctaaccggtccgaacgccgcattc
ggcgcgcagattcagaaaggtgcagagcaggccgccgaagacatcaatgctgcaggcggc
atcaatggggaacagatcaggattgtgctgggcgatgacgtttcggaccctaaacagggt
gtttccgttgcccagaaattcgtcgccgacggcgtgaagtttgtcgttggtcacttcaac
tcgggtgtgtcgatccctgcatcggaaatctacgccgaaaacggcctcctgcaggtcacg
cctgcctcgaccaacccgcagttcaccgaacgcggcctgtggaataccttccgcacctgc
ggccgggacgaccagcagggcgctgttgccggcgcctatatcgcggccaatttcaaggat
gcgaaggtcgccgtcattcacgacaagacgccctatggtcagggccttgccgacgaaacc
aagaagtcgatgaacgaagccggcgtcaccgaggccctctatgaaggcatcaacaccggc
gacaaggacttctccgcccttattgccaagatgaagcaggctggcgtttcgatcgtctat
tacggcggtctgcacacggaagccggcctgatcatgcgtcagatgaaggaccagggcctg
aaggcgacgctgatgtcgggcgacggcatcgtctcgaacgaactggcctcgatcgccggc
gacgccgttgacggtacgctgatgaccttcgcaccggatccgcgcaagagcccggctgcc
aaggatctcgtcgagaagttccgcactgcgggctttgagccggaagcctacacgctctat
gcttatgcggcccttcaggtcattgcagaaggtgccaaggctgccggcaatagcgatccg
caggccgtcgccgaagcgatcaaggccaaaggcccgtttaagaccgcgatcggcgaactc
ggcttcgacgaaaagggcgacatcacccgtccggactacgtcatgtacacctggaagaag
ggtgacgacggcaagttcagctacttccagaacgaatag
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