Sinorhizobium medicae: Smed_2409
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Entry
Smed_2409 CDS
T00555
Name
(GenBank) extracellular solute-binding protein family 1
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
smd
Sinorhizobium medicae
Pathway
smd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Smed_2409
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smd02000
]
Smed_2409
Transporters [BR:
smd02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Smed_2409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
ABR61241
UniProt:
A6UC61
LinkDB
All DBs
Position
complement(2484504..2485583)
Genome browser
AA seq
359 aa
AA seq
DB search
MIINSIKRRTLLGAGLAGASVLAMPSVLRAQDRSLKVGVYGGYFKDSFDKNIFPEFTKAS
GIAIESVAEPTGEAWLVQLEQAARAGQAPADVSMMSQVAMLKGQATDLWTPIDMAKIKNG
SNLIERFVNKYPDGRIAGIGAVSWYITLVTNTDSYKEAPTSWEAFWDPANADKLGLLALV
SNSFLLEVTAKTFMGGTNALDTEEGILKAFEKLAEVKPNVRLWYRDEAQFEQALKSGEIP
MGQYYHDVTGLAAADGHPVRSTFPKEGGIQDSGCWAVSRASQKVEEAHIFIDYMCQPAVQ
ATLSRKVGTSPTVKRESTDLTDKEFAGVSSDIEPIVPRYDLYQTKSDWLNQKWTELIVG
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcaattccatcaagcggcgcacgctgctcggtgcggggcttgccggcgcctcg
gtgctggcgatgccctcggtgctgcgggcgcaagacaggtcgctgaaagtcggcgtctat
ggcggctacttcaaggactcgttcgacaaaaacatcttccccgaattcaccaaggcatcg
ggcatcgcgatcgaatccgtcgccgagcctaccggcgaggcgtggctcgtccagctcgaa
caggccgcccgtgccggacaggcgcccgcggacgtttccatgatgtcgcaggtggcgatg
ctgaaagggcaggcgactgatctctggaccccgatcgacatggcgaagatcaagaacggc
tcgaacctgatcgagcgattcgtcaacaagtatccggacggccgcatcgccggtatcgga
gccgtctcctggtacatcacgctcgtgaccaacaccgacagctacaaggaggcgccgacc
tcatgggaggcgttctgggatccggcgaatgccgacaagctcggtctcctggcgctggtt
tccaattccttcctgctcgaagtaaccgccaagaccttcatgggcggcaccaatgcgttg
gacacggaagaagggattctcaaggcattcgagaagctggccgaggtgaagccgaacgtc
cgcctctggtaccgcgacgaagcgcagttcgagcaggcgctgaaatcgggcgaaatcccg
atgggacaatattatcatgacgtcacgggcctcgcggcggccgacggtcacccggtccgt
tccaccttcccgaaggagggcggcatccaggattccggctgctgggccgtgtcgcgtgcc
tctcagaaggtcgaagaagcgcatatcttcatcgattacatgtgccagcccgcggttcag
gcaacgctctcgcgcaaggttggcacctcgccgacggtcaagcgcgagtccaccgatctg
acggacaaggagtttgccggcgtttcctcggacatcgagccgatcgttccgcgctacgac
ctctaccagacgaagtcggattggctgaaccagaaatggacggagctgatcgtcggctga
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integrated database retrieval system
