Sinorhizobium medicae: Smed_2525
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Entry
Smed_2525 CDS
T00555
Name
(GenBank) HhH-GPD family protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
smd
Sinorhizobium medicae
Pathway
smd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Smed_2525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smd03400
]
Smed_2525
Enzymes [BR:
smd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
Smed_2525
DNA repair and recombination proteins [BR:
smd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Smed_2525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
Motif
Other DBs
NCBI-ProteinID:
ABR61355
UniProt:
A6UCH5
LinkDB
All DBs
Position
complement(2624555..2625202)
Genome browser
AA seq
215 aa
AA seq
DB search
MRIIRTHEDIEAGIAGLVLLDARLEHVVGKAGPVPLRRTDPGYRGLANIIVSQMVSKASA
AAIWKRMESLLGEITADAVLALDDDDCRRLGLSRAKADTLRRTAAAAVAGEIDLHAICDV
QAPAAIHELTAIKGIGRWTAEVYLLFCAGHPDVFPAGDVALQNAIGHALGFELRPTASEV
DSLAAAWSPWRSVAARLFWAYYAQEMRRDALPVVP
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatcatccggacgcacgaggacatagaggccggaatcgccggtctggtgctgctc
gatgcccggctcgaacatgtcgtcgggaaggcggggccggtgccgttgaggcgcaccgac
cccggttaccggggacttgccaacataatcgtgtcgcagatggtctcgaaagcgagtgcg
gcggcgatctggaagcggatggagtccttgcttggggagatcactgcagacgcggtgctt
gcgctcgacgatgacgattgccggcgcttgggcctgtcccgtgccaaggccgatacgctc
aggcgcaccgcggccgccgcggtagccggcgaaatcgacctgcatgccatctgcgacgtc
caagcgcccgcggcgatccacgaattgactgcgatcaagggcatcggccggtggactgcc
gaagtctatctgcttttctgcgccggtcatccggacgtcttccccgccggcgacgtcgcc
ctgcagaatgccatcggccacgcgctggggttcgaactgcgccccacggcaagcgaggtc
gattcgctcgctgccgcatggtcgccgtggcgcagcgtcgccgcgcggcttttttgggcc
tattatgcgcaggaaatgcgccgcgatgcgctccccgtggtgccctga
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