Sinorhizobium medicae: Smed_2618
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Entry
Smed_2618 CDS
T00555
Name
(GenBank) D-3-phosphoglycerate dehydrogenase
KO
K00058
D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:
1.1.1.95
1.1.1.399
]
Organism
smd
Sinorhizobium medicae
Pathway
smd00260
Glycine, serine and threonine metabolism
smd00270
Cysteine and methionine metabolism
smd00680
Methane metabolism
smd01100
Metabolic pathways
smd01110
Biosynthesis of secondary metabolites
smd01120
Microbial metabolism in diverse environments
smd01200
Carbon metabolism
smd01230
Biosynthesis of amino acids
Module
smd_M00020
Serine biosynthesis, glycerate-3P => serine
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
Smed_2618
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Smed_2618
00270 Cysteine and methionine metabolism
Smed_2618
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smd04147
]
Smed_2618
Enzymes [BR:
smd01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.95 phosphoglycerate dehydrogenase
Smed_2618
1.1.1.399 2-oxoglutarate reductase
Smed_2618
Exosome [BR:
smd04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
Smed_2618
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
2-Hacid_dh_C
PGDH_inter
2-Hacid_dh
ACT
NAD_binding_2
F420_oxidored
IlvN
UPF0020
Motif
Other DBs
NCBI-ProteinID:
ABR61448
UniProt:
A6UCR8
LinkDB
All DBs
Position
complement(2715154..2716749)
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AA seq
531 aa
AA seq
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MAPRVLVSDELSETAVQIFRDHGVEVDFQPKLGKDKEKLAEIIGNYDGLAIRSATKVTEK
LIAAATNLKVVGRAGIGVDNVDIPAASRRGIIVMNTPFGNSITTAEHAIALMFAVARQLP
AADGSTQAGKWEKSKFMGVEITGKVLGVIGAGNIGSIVCARAIGLKMHVIAYDPFLSKER
AEEMGVAKVELDELLAQADFISLHVPLTDKTRSILNAEAIAKAKPGVRIINCARGGLVDE
KALAEAIKSGHVAGAGFDVFEVEPATDSPLFGLPNVVCTPHLGASTTEAQENVALQVAEQ
MSEYLVKGAVTNAINMPSITAEEAPMLKPFIRLADVLGAFVGQVTESAIKEIEILYDGST
AAMNTKALTSAALAGLIRPQVADVNMVSAPVMIKEKGVILSEVKRDKTGVFDGYIKLTVK
TANQTRSVAGTVFSDGKPRFIQIKGINLDADVGAHMVYLTNTDVPGMIGFIGSTLGDAGV
NIANFQLGREKQGGDAIALLYVDGPVSETVLDRLRANEAIRQAKPLVFNID
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggcacctcgcgttctcgtatccgatgaactctctgaaaccgccgtccagatcttccgc
gaccacggcgtggaagtcgatttccagcccaagctcggcaaggacaaggagaagctcgcc
gaaatcatcggcaattacgacggccttgccattcgctcggccaccaaagtgaccgaaaag
ctgatcgccgcggccaccaatctcaaggtcgtcggccgcgccggtatcggcgtcgacaat
gtcgacattcccgcggcttctcgccgcggcatcatcgtgatgaacacgccgttcggcaat
tcaatcaccactgccgagcacgccatcgcgctgatgtttgccgttgcccggcagcttccc
gccgccgacggttcgacccaggccggcaagtgggagaagtcgaagttcatgggtgtcgag
atcaccggcaaggtgctcggggtcatcggcgccggcaatataggctcgatcgtctgtgcc
cgtgcaatcgggctcaagatgcatgtcattgcttacgatcccttcctgtcgaaggagcgg
gccgaggaaatgggcgtggccaaggtcgagctcgacgagctcctcgcccaggctgatttc
atcagcctgcacgtgccgctgacggacaagacccgcagcatcctgaatgcggaggcgatc
gccaaggccaagccgggcgtgcgcatcatcaattgcgctcgaggcggcctcgtcgatgag
aaggcgcttgccgaggccatcaagtccgggcatgtcgccggcgccggtttcgacgtattc
gaagtggagcccgccacagatagtccgctcttcggtctgccaaatgtcgtctgcacgccg
catctcggcgcctcgacgaccgaggcgcaggaaaacgtcgctctgcaagttgccgagcag
atgtcggaatacctcgtcaagggcgcggtcaccaacgccatcaacatgccgtcgatcacg
gccgaggaggcgccgatgctcaagcccttcatccggcttgcggatgttctcggcgccttt
gtcgggcaggtcaccgaaagcgccatcaaggagatcgagatactctatgacggctcgacc
gcggcgatgaacacgaaagcgctgacgagcgcggctctcgcaggtctgatccggccgcag
gtcgccgacgtcaacatggtttcggctccggtgatgatcaaggaaaagggtgtcattctt
tccgaggtcaagcgcgacaagacgggcgttttcgacggctacatcaaacttacggtgaag
acggcgaaccagacccgctcggtcgccggtacggtcttctccgacggcaagccgcgcttc
atccagatcaagggcatcaatctcgacgcggatgtcggcgcccacatggtctacctgacc
aataccgacgttcccggcatgatcggcttcatcggctccacactcggcgacgccggcgtc
aacatcgcgaacttccagctcggccgcgagaagcagggcggcgatgcgatcgcgctgctt
tacgtcgacggtccggtttcggagaccgtgctcgacaggctgcgcgcaaacgaagcgatc
cgccaggcgaagccgctggtgttcaatatcgactga
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