Sinorhizobium medicae: Smed_2638
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Entry
Smed_2638 CDS
T00555
Name
(GenBank) Holliday junction DNA helicase RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
smd
Sinorhizobium medicae
Pathway
smd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Smed_2638
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smd03400
]
Smed_2638
DNA repair and recombination proteins [BR:
smd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Smed_2638
RecFOR pathway proteins
Smed_2638
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
HHH
HHH_2
UBA_7
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
ABR61468
UniProt:
A6UCT8
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All DBs
Position
complement(2740014..2740631)
Genome browser
AA seq
205 aa
AA seq
DB search
MIGKLKGTIDEIGEDHVVLDVHGVGYVAHCSARTLAKLGRAGEAAVLFIETYVREDQLKL
FGFLSALEREWFRLLQSVQGVGSKVALAVLSTLTPGELANAIALQDKTSISRAPGVGPKV
AVRIVTELKNKAPAFVGEMAPSIGLKQELGEGVAAAPVSDAVSALTNLGYSRDQAANAVA
AALKNGGEGADSARLIRLGLKELSR
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgatcggcaagctgaaaggcaccatagacgagatcggcgaggatcatgtggtactcgac
gtgcatggcgtcggatatgtcgcccattgttcggcgcgcacgctcgcaaagctcggaagg
gcgggagaggcggccgtgctcttcatcgagacctatgtgcgcgaggatcagctgaagctg
ttcggctttctgagcgcattggagcgtgaatggttccggctgcttcagagcgttcagggt
gtggggtccaaggtcgcgctggcggttctttccacgctgactccgggcgaactcgccaat
gccatcgcactgcaggacaagacgtcgatctcgcgcgcgccgggtgtcggcccgaaagtc
gccgtgcgcatcgtcaccgaactcaagaacaaggcccccgctttcgtcggcgagatggca
ccgtcgatcggcctaaagcaggaactcggggaaggcgttgccgccgcgccggtctcggat
gcggtctcggcgctcaccaatctcggctattcgcgcgaccaggctgcgaatgccgttgca
gccgcgctgaaaaacggcggggagggcgccgacagcgccaggctgatccgccttggcctc
aaggaactgtcgcggtga
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