Sinorhizobium medicae: Smed_2800
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Entry
Smed_2800 CDS
T00555
Name
(GenBank) lysyl-tRNA synthetase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
smd
Sinorhizobium medicae
Pathway
smd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Smed_2800
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
smd01007
]
Smed_2800
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smd03016
]
Smed_2800
Enzymes [BR:
smd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
Smed_2800
Amino acid related enzymes [BR:
smd01007
]
Aminoacyl-tRNA synthetase
Class II (A)
Smed_2800
Transfer RNA biogenesis [BR:
smd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Smed_2800
Prokaryotic type
Other AARSs
Smed_2800
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
ABR61630
UniProt:
A6UDA0
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All DBs
Position
2922188..2923684
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AA seq
498 aa
AA seq
DB search
MTDKTENSGLSSDATEVRAQKLKLLREQIGDVYPAHFHRTMTNAELAEKYQDLAPDTETQ
DLVTVAGRVYSSRNSGMFMDIHDASGKIQVFSHKDTTPEEARGLLPMIDLGDVIGVTGLV
RRTKRGELTINAQQITMLTKSLLPMPEKYHGLADIETRYRKRYLDIMVNEESKLRFQQRS
RIVSSLRRFLEDEGFMEVETPMLQPIYGGATAEPFKTHHNTLKLDMYLRIAPELYLKRVL
VSGLTDKVFEINRNFRNEGVSTRHNPEFTMMECYWAYADYEDVMGLVERMFETLALAVHG
TTEFEFGDKQLSFKGPFPRVSMPAAVKDATGIDFLAIKSDEEARQAARDAGVEIEKDATW
GEVLAFLFEEKVEATLIQPAHVIHFPKDISPFAKEVPGEPRLVERFETYCNGWEIGNAFS
ELNDPVEQRARMVEQMEQAHARGEKEKTLDEDFLDAMDQGMPPAGGLGIGVDRLIMLLTN
SPSIRDIILFPARRHKSD
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgaccgataagacagaaaactccggcctttcctccgatgcgacggaagtacgcgcccag
aagctgaagctcctgcgcgagcagatcggcgatgtctatcccgcgcatttccatcggacg
atgaccaatgcggaattggccgagaagtaccaggacctcgcgccggacacggagacgcag
gacctcgtcaccgttgccggacgagtctattcctcgcgcaattccggcatgttcatggac
atccatgacgcttccggcaagatccaggtcttctcccacaaggacacgacgcctgaggag
gcgcgtggcctcctgccgatgatcgacctcggagatgtcatcggcgtcaccgggctcgtc
cgccgcacgaagcgcggcgaactgacgatcaacgcgcagcagatcaccatgctgaccaag
tcgctcctgccgatgccggaaaagtatcacggccttgcagacatcgagacgcgctatcgc
aagcgatatctggacatcatggtcaatgaggaatcgaagctgcgcttccagcaaagaagt
cgcatcgtctccagcctgcgccgcttcctcgaggacgaaggcttcatggaagtcgagacg
ccgatgctgcagccgatctacggtggcgcgacggccgagcccttcaagacccatcacaat
acgctgaagctcgatatgtatctgcgcatcgcgcccgagctttatctcaagcgcgtgctg
gtctccggtctcaccgacaaagtcttcgaaatcaaccgcaacttccgcaacgaaggcgtc
tccacccggcacaatccggaattcaccatgatggagtgctattgggcctatgccgactat
gaagacgtaatgggcctcgtcgaacgtatgttcgagacccttgctctggcggtccacggc
acgaccgaattcgagttcggcgacaagcagctctccttcaaggggccgttcccgcgcgtc
tccatgcccgccgctgtcaaggacgcgaccggcattgatttcctagcgatcaaaagcgac
gaggaggcccgacaggcggctcgcgatgccggtgtcgagatcgagaaggacgcgacatgg
ggcgaggtgctcgccttcctcttcgaggaaaaggtcgaagcgacgctgatccagcctgcc
cacgtcatccatttcccgaaggacatctcgcccttcgccaaagaggtgccgggcgagccg
aggctcgtcgagcggttcgagacctattgcaacggatgggagatcggcaacgccttttcc
gagctcaacgacccggtcgagcaacgcgctcgtatggtcgaacaaatggaacaggcgcac
gcacgcggcgagaaggaaaagacgctcgacgaggacttcctcgatgccatggaccagggc
atgccgcccgcaggtggtttggggatcggtgtcgaccggctgatcatgctgctcaccaac
tcgccgtcgatccgcgacatcattctcttcccggcccgacgccataagtccgattga
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