KEGG   Sinorhizobium medicae: Smed_2820
Entry
Smed_2820         CDS       T00555                                 
Name
(GenBank) uracil-DNA glycosylase
  KO
K03648  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
smd  Sinorhizobium medicae
Pathway
smd03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:smd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Smed_2820
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:smd03400]
    Smed_2820
Enzymes [BR:smd01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     Smed_2820
DNA repair and recombination proteins [BR:smd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Smed_2820
 Prokaryotic type
     Smed_2820
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: ABR61650
UniProt: A6UDC0
LinkDB
Position
complement(2944719..2945444)
AA seq 241 aa
MDSTIRLEESWKAALGPEFRNGYMTELKRFLLDEKQQGRQVFPRGGEYFRALDLTPLDRV
RVVILGQDPYHGDGQAHGLCFSVRPGVRTPPSLVNIYKELKEDLGIDPARHGFLESWARQ
GVLLLNSVLTVERGRAASHQGRGWERFTDAVIRAVNEQAQPVVFMLWGSYAQRKAAFVDR
SRHLVLTAPHPSPLSAHSGFFGCRHFSKANAFLTSKGLDPIDWRLPEDPPLAVERPTPPN
C
NT seq 726 nt   +upstreamnt  +downstreamnt
atggattcgacgatacggctggaagagagctggaaagcggccctcggccccgagttccgc
aacggctacatgaccgagctcaagcgtttcctgctggacgaaaagcaacagggccgacag
gtttttccgaggggtggcgaatattttcgcgcgctcgatcttacccccctcgacagggtt
cgtgtcgtgatcctcggtcaggatccatatcatggcgacgggcaggcgcacggcctctgc
ttcagtgttcgtcccggcgtgcgtacaccgccttcgctcgtcaacatctacaaggagctc
aaggaagacctcggcatagatccggcgcgccacggttttctcgaaagctgggcgcgccag
ggcgtgttgctgctgaacagcgtgctaacggtggagcgcggccgggcggcttcgcatcag
ggcagaggatgggaacgctttaccgatgcggtcatccgcgccgtcaatgagcaggcgcag
cccgtcgtcttcatgctctggggctcttatgcgcaacgcaaggcggcgttcgtcgaccgc
tcgcgccatctcgtgctcacggcgccgcatccgtcaccgctttcggcgcattcgggcttc
ttcggctgccggcatttctccaaggcgaatgcctttctcacgtccaaggggctcgacccg
atcgactggcggttgccggaagatccgcccctggcagtggaacggccgacgccgccgaac
tgctga

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