Sinorhizobium medicae: Smed_3068
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Entry
Smed_3068 CDS
T00555
Name
(GenBank) radical SAM enzyme, Cfr family
KO
K06941
23S rRNA (adenine2503-C2)-methyltransferase [EC:
2.1.1.192
]
Organism
smd
Sinorhizobium medicae
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smd03009
]
Smed_3068
Enzymes [BR:
smd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.192 23S rRNA (adenine2503-C2)-methyltransferase
Smed_3068
Ribosome biogenesis [BR:
smd03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Smed_3068
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
RlmN_N
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
ABR61894
UniProt:
A6UE14
LinkDB
All DBs
Position
complement(3216694..3217935)
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AA seq
413 aa
AA seq
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MSMAATETLNRTDIAKAPQVRLAAQPEKPSLIGLLREDMAKLLVEKGVPERQVKMRVSQV
WHWLYVRGVSDFNEMSNVSKDMREMLSAHFTIARPEIVEEQVSGDGTRKWLLRFPPRGAG
RPVEIETVYIPEEGRGTLCISSQVGCTLTCSFCHTGTQKLVRNLTAEEILAQLLLARDRL
GDFPDRDTPQGAIVPAEGRKITNVVMMGMGEPLYNFENVKTALLIASDGDGLSLSKRRIT
LSTSGIVPEIYRTGEEIGVMLAISLHAVRDDLRDMLVPINKKYPLKELMEACRAYPGLSN
ARRITFEYVMLKDVNDSLEDAKELVKLLKGIPAKINLIPFNPWPGTNYQCSDWEQIEKFA
DFINQAGYASPIRTPRGRDILAACGQLKSDSERMRKVDRLAFEAMMIANHGED
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgagcatggcagccaccgaaaccttgaacaggaccgacatcgccaaggcgccgcaggtg
cggcttgcggcacagccggaaaagccgtcgctgatcggcctgttgcgcgaagatatggcg
aagctgctcgtcgagaaaggcgtgccggagcgccaggtgaagatgcgcgtcagccaagtc
tggcactggctttatgtccgcggcgtctcggatttcaacgagatgtcgaatgtctccaag
gacatgcgcgagatgctcagtgcgcatttcaccatcgcgcggccggagatcgtcgaagag
caggtttccggcgacggcacgcgcaaatggctgctgcgcttccctccgcgcggagccggc
cgcccggtggagatcgagacggtctacattcccgaggaaggccgcggtacgctctgcatt
tccagccaagtcggctgcacgctcacctgctccttctgtcataccggcacgcagaagctg
gtgcgcaatctgacggcggaagaaattctcgcgcagcttctgcttgcgcgtgaccggctc
ggcgatttcccggatcgcgacacgccgcagggcgccatcgtaccggcggaaggccgcaag
atcaccaatgtcgtgatgatgggcatgggcgagccgctctacaatttcgagaacgtcaag
acggcgcttctgatcgcctccgacggcgacgggctgtcgctttcgaagcgacgcatcacc
ctttcgacctcgggcattgtgccggagatctaccgcaccggcgaggaaatcggggtcatg
ctcgcgatctcgcttcacgccgtgcgcgacgatctgcgcgatatgctggtgccgatcaac
aagaagtatccgctgaaggagctgatggaggcctgccgcgcctatccgggcttgtcgaat
gcccgccgcatcaccttcgaatatgtgatgctgaaggatgtcaacgacagcctggaagac
gccaaggaactggtgaagctcctgaagggcattcccgccaagataaacctgatcccgttc
aatccctggccgggaaccaattaccagtgctcggactgggagcagatcgagaagtttgcc
gatttcatcaatcaggcgggctacgcttcgccgatccgcaccccgcgcgggcgcgacatt
ctggccgcttgcggccagcttaagtcggactcggagcgcatgcgcaaggtcgaccgcctt
gccttcgaggcgatgatgattgccaatcacggcgaggactag
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