Sinorhizobium medicae: Smed_3092
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Entry
Smed_3092 CDS
T00555
Name
(GenBank) MiaB-like tRNA modifying enzyme
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
smd
Sinorhizobium medicae
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smd03016
]
Smed_3092
Enzymes [BR:
smd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
Smed_3092
Transfer RNA biogenesis [BR:
smd03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
Smed_3092
Prokaryotic type
Methylthiotransferases
Smed_3092
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
B12-binding
Lipase_GDSL_2
Motif
Other DBs
NCBI-ProteinID:
ABR61918
UniProt:
A6UE38
LinkDB
All DBs
Position
complement(3238468..3239742)
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AA seq
424 aa
AA seq
DB search
MSGVEVITFGCRLNTYESEVMRAEAEKAGLNNAVLVNTCAVTAEAVRQARQAIRRARREN
PHARIIVTGCAAQTEKETFAEMAEVDAVLGNEEKLTSASYRSLPDFGVSAEEKLRVNDIM
SVRATAPQMVKHIDGHVRAFIQVQNGCDHRCTFCIIPYGRGNSRSVPMGAVVDQARRLVE
GGYREIVLTGVDATSYGADLPGTPTLGLLAKTLLKQVPEILRLRLSSIDSIEADVHLLDL
IAEEPRFMPHLHLSLQHGDDLMLKRMKRRHSSADARAFCAEVLRLRPEISFSADMIAGFP
TETEAMFQNAVRLAEDCGLAHLHVFPYSPRPGTPAARMPQLDRVLVKERAARLRAKGAEL
HTVHLERMVGSRQMVLVEMNGLAHTENFTLVDAAGLEPRSLVAAEITGHNGKHLTIKRKQ
MAAA
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
ttgagcggcgtcgaggtcataaccttcggctgccgtctgaacacctacgaatcggaagtg
atgcgggcagaggccgaaaaggcggggctgaacaatgccgtgctcgtcaacacctgcgcc
gtgaccgccgaggcggtgcgccaggcgcgccaggccatccgccgcgcgcggcgcgagaac
ccgcacgcccgtatcatcgtcaccggctgcgccgcgcagaccgagaaggaaactttcgcg
gagatggcggaggtggacgcggttctcggcaatgaggagaagctcacgagcgcttcctat
cgctcgctgcccgatttcggcgtctcggccgaggagaaactccgggtgaacgatatcatg
agcgtgcgcgccaccgcgccgcaaatggtgaagcatatcgacgggcacgtgcgtgccttc
atccaggtgcagaatggctgtgatcatcgctgcaccttctgcatcatcccttatggacgc
ggcaattcccgctcggtgccgatgggcgccgtcgtcgaccaggcgagacgccttgtcgag
ggcggctatcgcgagatcgtgctgaccggcgtcgatgccaccagctacggcgccgacctg
cccggaacgccaaccctcggacttctcgccaagaccttgctgaagcaggtcccggagatc
cttcgtctacggctttcctccatcgacagcatcgaggcggacgtccatcttctcgatctc
attgccgaagagccgcgtttcatgccgcatctgcatctctcgctgcagcatggcgacgac
ctgatgctgaagcggatgaagcggcggcattcaagtgccgacgcgcgcgccttctgcgcg
gaggtccttcggctccgacccgaaatcagtttcagcgccgacatgatcgccggctttccg
accgagaccgaggcgatgttccagaatgccgtcaggcttgctgaggattgcggccttgcg
catctgcacgtcttcccctacagcccacgccccggcacgccggcggcccgcatgccgcag
ctcgaccgcgtgctcgtcaaagagcgtgccgcacgcctgcgtgcaaagggcgccgagctc
catacggtccatctcgaacgcatggtcggcagcaggcaaatggtgctggtggagatgaac
ggtctggcacataccgaaaacttcacgctcgtcgatgcggccggcctcgagccgcgatcg
ctcgttgcggccgaaatcaccggccataacggcaagcatctgacgatcaagcgcaaacag
atggctgcggcctga
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