KEGG   Sinorhizobium medicae: Smed_3213
Entry
Smed_3213         CDS       T00555                                 
Name
(GenBank) DNA polymerase III, epsilon subunit
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
smd  Sinorhizobium medicae
Pathway
smd03030  DNA replication
smd03430  Mismatch repair
smd03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:smd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Smed_3213
   03430 Mismatch repair
    Smed_3213
   03440 Homologous recombination
    Smed_3213
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:smd03032]
    Smed_3213
   03400 DNA repair and recombination proteins [BR:smd03400]
    Smed_3213
Enzymes [BR:smd01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Smed_3213
DNA replication proteins [BR:smd03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Smed_3213
DNA repair and recombination proteins [BR:smd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Smed_3213
SSDB
Motif
Pfam: RNase_T RNase_H_2 DNA_pol_A_exo1 Rv2179c-like
Other DBs
NCBI-ProteinID: ABR62037
UniProt: A6UEF7
LinkDB
Position
3388060..3388788
AA seq 242 aa
MREIIFDTETTGLDNREDRVIEIGGIELENQFPTGRTIHIYINPGDRKVHPEALAVHGIT
DDFLKDKPSFAEIAQEIVDFFGDARWVAHNATFDMGFINAEFERLGLPPVGSDRVIDTLS
LARRKHPMGPNSLDALCRRYGIDNSHRTRHGALLDSELLAEVYIEMIGGRQAALGLVMTE
TGGRSLEADDGPVIIVGRERPLRPRLTEAEIAAHAALVSKIGANAIWAKFSEAEDILRSE
AV
NT seq 729 nt   +upstreamnt  +downstreamnt
atgcgtgaaatcatcttcgatacggaaacgaccggtctcgacaaccgcgaggaccgggtc
atcgagatcggcggaatcgagctcgagaatcagtttccgacggggcgcacgatccatatc
tatatcaatccgggcgatcgcaaggttcatccggaagcgctcgccgtccacggcattacg
gatgatttcctgaaggacaagccgtccttcgccgagatagcacaggaaatcgtcgatttc
ttcggcgatgcccgctgggtcgcccacaacgcgaccttcgatatgggcttcatcaatgcg
gagtttgagcggctcggtctgccgccggttggcagcgacagggtgatcgacacgctatcc
cttgcccggcgcaagcacccgatggggccgaattcgctcgatgcgctctgccgccgctac
ggtatcgacaactcccatcgaaccaggcacggggcgctgctcgactccgaactcctcgcc
gaagtctatattgagatgatcggggggcgccaggcggcgctgggtctcgtgatgacggag
acgggtggacggtcgctcgaagccgacgacgggccggttatcatcgtcgggagggagcgg
cctttgcggccacggctgacggaggccgaaatcgctgctcatgcggcgctcgtctcgaag
atcggcgcaaatgcaatatgggcaaaattcagcgaagctgaagatatcctgagatcggaa
gccgtttag

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