Sinorhizobium medicae: Smed_3544
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Entry
Smed_3544 CDS
T00555
Name
(GenBank) Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase
KO
K07056
16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:
2.1.1.198
]
Organism
smd
Sinorhizobium medicae
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smd03009
]
Smed_3544
Enzymes [BR:
smd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.198 16S rRNA (cytidine1402-2'-O)-methyltransferase
Smed_3544
Ribosome biogenesis [BR:
smd03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Smed_3544
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TP_methylase
RsmI_C
WH4_Lhr
dnstrm_HI1420
Motif
Other DBs
NCBI-ProteinID:
ABR62360
UniProt:
A6UFD0
LinkDB
All DBs
Position
3750240..3751202
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AA seq
320 aa
AA seq
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MIGATRDWKAALEKQQSAEVSEKERQRGFRLHNANIPARPLEPCLYLVATPIGNLGDITL
RALETIAAADVLACEDTRVTRVLLDRYGIVNRPIAYHEHNAAEAGPRLLAALDGGKSVAL
VSDAGTPLVSDPGYRLAQQAVEAGYRVVPVPGPSAPLAALVGSGLPSDAFLFAGFLPGKD
KAKRDRLAELANIPATLIFFESPHRIAATLTAAAEVLGEDRRAAVCRELTKAFEEFRRGT
LGELRTAYDEGGNVKGEIVLVVGPPEARPQPEAADIDALLRALARDLPMGKAATEAAHRT
GLARKALYDRLLELKDSDEG
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgatcggggccacgagggattggaaggcggcgttggagaagcagcaatcggcggaagtg
tcggaaaaggaacggcaacgcggctttcgcctgcacaatgcgaatattcccgcgcgtccg
ctggagccgtgcctttatctcgtcgcaacgccgatcggcaatctcggcgacatcaccctc
agagccctcgagacaattgccgcggcggacgtcctcgcctgcgaagacacgcgcgtgacg
cgggtcctgctcgaccgctacggcatcgtcaaccggcctatcgcctatcacgagcacaat
gccgccgaggcaggtccgcgcctgcttgcagcgcttgacggcggcaaatcggtggcactc
gtttccgacgcaggcacgccgctcgtctccgatcctggctatcgtctggcgcagcaggcg
gtcgaggccgggtaccgggtggtgccggtgccgggaccctcggcgccgcttgcggctctc
gtcggttccggccttccgagcgatgccttcctcttcgccggcttcctgccgggtaaggac
aaggccaagcgcgaccggcttgcggaactcgccaacatcccggccactctcatcttcttc
gagtccccgcatcgcatcgccgcgaccctcactgctgccgccgaggttctcggcgaagac
cggagggcggccgtctgccgcgaactgaccaaggctttcgaggagttccgccgaggcacg
ctcggcgagctcaggacagcttacgacgaaggcggcaatgtgaagggcgagatcgtcctg
gtggtcggtccgcccgaggcaaggccgcagccggaggcagccgatatcgacgcgctcctc
agggcgcttgcccgagatctgccgatgggcaaggcagcgacggaggccgcgcatcgcaca
ggacttgcacgcaaggcgctttacgaccggctcctcgagctcaaggacagcgatgaaggc
tga
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