Sinorhizobium medicae: Smed_3734
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Entry
Smed_3734 CDS
T00555
Name
(GenBank) putative ABC transporter periplasmic solute-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
smd
Sinorhizobium medicae
Pathway
smd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Smed_3734
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smd02000
]
Smed_3734
Transporters [BR:
smd02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Smed_3734
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
ABR62547
UniProt:
A6UFW7
LinkDB
All DBs
Position
pSMED01:178111..179184
Genome browser
AA seq
357 aa
AA seq
DB search
MEMFKNASATPLSRRAVLGAGLFGAAMLASPSIRRASAEENALYVNTWGGDWEASVKKFL
FEPFTADTGIEIRTVSPISFAKLAAQKTTGVYEFDVTTLGVADVARANGAGLLETLEGHV
DTSKLWEGAIYENGLATHGFATQMAYNAAKFPEGLKNWSDFFNVEKFPGNRSLQRHAARV
LAIALLADGVPADQLFPYDLDRAFASLDRIKDHVRVWWTAGPQARQILTDGEVDMAGLWD
SDAFGAKEASKEPIEIVWDQAVVDKACWIVAKDSPRAENGFKLISHIGQNAEGLAKFCIA
DQNGPMNPKSFDFIPAEVAARMPTHPEHLARAVMLDGAKLLPQLHELSTRFESWVGI
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggaaatgttcaagaatgcatcagccacgccgctatcgcgacgtgccgttctcggcgcc
ggacttttcggggccgcaatgctggcttccccctctatccgacgcgccagcgcggaggag
aacgccctttatgtcaacacctggggcggcgactgggaggcatcggtcaagaagttcctg
ttcgagccgtttacggcggatacgggaatagagatccgcacagtctcgccgatttccttc
gccaagctcgcggcgcagaagaccacgggcgtctacgagttcgacgtcaccacgctcggc
gtcgcagacgtcgcgcgcgccaatggggcgggcctactcgagacgctggaaggtcacgtc
gacacctccaagctttgggaaggcgccatctacgaaaacgggctggcaacgcatggcttt
gccacgcagatggcctacaatgccgctaaattccctgaagggctgaagaactggtccgat
ttctttaacgtcgagaagttcccaggcaaccgcagcctgcagcgtcacgccgcccgcgtc
ctggcgatcgcgctgcttgccgacggcgttccggccgaccagctcttcccctacgacctc
gaccgcgccttcgcctcgctcgaccggatcaaagaccatgtccgcgtctggtggaccgcc
gggccgcaggcgcggcagatcctgaccgacggtgaagtggacatggcggggctctgggat
agcgacgccttcggcgccaaggaggcttccaaggagccgatcgaaattgtctgggaccag
gccgtcgtcgacaaggcctgctggatcgtcgccaaggacagcccgcgtgcagaaaacggc
ttcaagctgatcagccatatcggccagaacgccgaggggctcgcaaagttctgcatcgcg
gaccagaacggtccgatgaacccgaagtcgttcgatttcattccagccgaggtcgcggcc
agaatgccgacccatccggagcacctcgcccgggccgtcatgctggacggggcgaagctg
ctgccccagctgcacgagctgtccacccgtttcgaaagctgggtcggtatctga
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