Sinorhizobium medicae: Smed_3887
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Entry
Smed_3887 CDS
T00555
Name
(GenBank) NAD-dependent epimerase/dehydratase
KO
K17947
dTDP-L-rhamnose 4-epimerase [EC:
5.1.3.25
]
Organism
smd
Sinorhizobium medicae
Pathway
smd00523
Polyketide sugar unit biosynthesis
smd01110
Biosynthesis of secondary metabolites
smd01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
Smed_3887
Enzymes [BR:
smd01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.25 dTDP-L-rhamnose 4-epimerase
Smed_3887
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
NAD_binding_10
RmlD_sub_bind
NmrA
Sacchrp_dh_NADP
adh_short
KR
Motif
Other DBs
NCBI-ProteinID:
ABR62699
UniProt:
A6UGB9
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Position
pSMED01:344603..345709
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AA seq
368 aa
AA seq
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MTKVLVTGGCGFIGRHVVEELLSGNYELRILDALNEQVHADAQITLPPEVDMRRADICDA
DAVKSALKDVDHVIHLAAEVGVGQSMYEISRYVGVNDLGTAVLLEAMIGMPIRRIVVASS
MSVYGEGLYETAAGERRAHIRRSPAEIKTGAWNPSGPDGESLKPIATDENKPVDLASIYA
LTKYAQERQVLIFGEAYGMDAVALRLFNVYGAGQALSNPYTGVLANFASRLANGQAPMVF
EDGRQKRDFVHVRDVARAFRLALEQPHAAGHVINIGSGHAYAIADIASLLADAMGVPEIG
PEIMHKARSGDIRNCFADISKARDLLGFEPAHRLEDSLADFAQWVRSAGAIDRGAEMKRH
LEARGLVL
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaagtacttgttaccggcggctgcggtttcattggccggcatgtggtcgaagag
cttctctctgggaactacgagttgcgcatcctcgatgcgctgaacgaacaggtccatgcg
gacgcccagatcaccctgccaccggaagtagatatgcggcgcgccgatatatgcgacgct
gacgcggtgaagagcgcactgaaggacgtcgatcacgtcattcatctcgctgcggaggtc
ggcgtcggccaatccatgtacgagatctcccgctatgtgggcgtgaacgacctgggcacc
gccgtcctgctcgaggcgatgatcggcatgccgatccggcggatcgtcgtcgcctcttcc
atgagcgtttacggcgagggcttgtacgagactgcggccggggaacgccgcgcgcatatc
cggcggtctcccgccgagatcaagacgggtgcgtggaacccgtccggccccgatggcgag
agcctgaagccgatcgcgacggacgagaacaagccggtcgatcttgcctccatctacgca
ctcacgaaatatgcgcaggagcgtcaggtccttatattcggtgaagcctatggcatggac
gcggtggcgcttcggcttttcaacgtctacggcgccggtcaggcactctccaatccctat
accggagtgcttgccaacttcgcctctcgacttgccaacgggcaggcgccgatggtcttt
gaggacggccgtcagaagcgcgacttcgtccatgttcgcgacgtcgcgcgcgctttccgg
cttgcgctcgaacagccgcacgccgcgggccacgtcatcaatatcggcagcgggcacgct
tacgcgatcgctgacatcgcctcgctgcttgccgatgcgatgggcgtgccggagatcggg
ccggagatcatgcacaaggctcgttcaggagatatccgcaattgcttcgcggatatttcc
aaggcgcgcgacctcctcggcttcgagccggcgcaccggcttgaagattcgctcgcggat
ttcgcccaatgggtccgcagtgccggcgcgatcgaccgcggcgccgagatgaagcgccac
ttggaagcacgggggctggttctatga
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