Sinorhizobium medicae: Smed_3924
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Entry
Smed_3924 CDS
T00555
Name
(GenBank) Ribulose-bisphosphate carboxylase
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
smd
Sinorhizobium medicae
Pathway
smd00630
Glyoxylate and dicarboxylate metabolism
smd00710
Carbon fixation by Calvin cycle
smd01100
Metabolic pathways
smd01110
Biosynthesis of secondary metabolites
smd01120
Microbial metabolism in diverse environments
smd01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Smed_3924
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
Smed_3924
Enzymes [BR:
smd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
Smed_3924
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Motif
Other DBs
NCBI-ProteinID:
ABR62734
UniProt:
P56889
LinkDB
All DBs
Position
pSMED01:376768..378228
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AA seq
486 aa
AA seq
DB search
MNADAKTEIKGRERYKAGVLKYAQMGYWNGDYEPKDTDLIALFRITPQDGVDPIEAAAAV
AGESSTATWTVVWTDRLTACDQYRAKAYRVDPVPGTPGQYFCYVAYDLILFEEGSIANLT
ASIIGNVFSFKPLKAARLEDMRLPVAYVKTFKGPPTGIVVERERLDKFGKPLLGATTKPK
LGLSGKNYGRVVYEGLKGGLDFMKDDENINSQPFMHWRDRYLYCMEAVNHASAVTGEVKG
HYLNVTAGTMEEMYRRAEFAKELGSVIVMVDLIIGWTAIQSMSEWCRQNDMILHMHRAGH
GTYTRQKNHGISFRVIAKWLRLAGVDHLHAGTAVGKLEGDPLTVQGYYNVCREMKNAVDL
PRGLFFEQDWADLKKVLPVASGGIHAGQMHQLLDLFGDDVVLQFGGGTIGHPMGIQAGAT
ANRVALEAMVLARNEGRDIAHEGPEILRAAAKWCKPLEAALDTWGNISFNYTPTDTSDFV
PSVTAA
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctgatgcaaagacagagatcaagggccgggaacgctataaggccggcgtgctt
aaatacgcgcagatgggctactggaacggagactacgaaccgaaggacaccgatctgatc
gcactcttccggatcacgccgcaggatggcgtcgatccgatcgaagcggccgccgccgtt
gccggcgaaagttcgacagccacctggaccgtcgtctggacggatcgcctcacggcttgc
gatcaatatcgcgccaaggcttaccgggtggatccggtaccgggaacgccaggccaatat
ttctgctacgtcgcctacgatctgatcctgttcgaggaagggtcgatcgccaacctgacc
gcgtccatcatcggcaacgtcttctcgttcaagccgctgaaggcggcaagactcgaggac
atgcgcctgcccgtcgcctatgtgaagaccttcaagggtccaccgacgggcatcgtggtc
gagcgtgagcggctggacaagttcggcaaaccgttgctcggcgccacgaccaagccgaag
ctcgggctttcgggaaagaattacggccgcgtcgtctatgagggcctgaagggcggtctc
gacttcatgaaggacgacgagaacatcaattcgcagcccttcatgcattggcgcgaccgg
tacctttactgcatggaggccgtcaaccacgcctcggccgtcaccggcgaggtcaagggg
cactacctcaacgtcaccgccggcaccatggaggaaatgtaccggcgtgccgaattcgca
aaggagctcggctccgtcatcgttatggtcgatctcatcatcggctggactgcaattcag
tcgatgtcggaatggtgccggcagaatgacatgatcctgcacatgcaccgggccggtcac
ggcacctatacgcggcagaagaaccacggcatttcgttccgcgtcatcgccaaatggctg
cggctcgccggcgtcgatcaccttcatgcgggcacggccgtcggcaagctcgaaggcgac
ccgttgactgtgcagggttactacaatgtctgccgcgaaatgaagaacgcggtcgatctt
ccgcgcggcctcttcttcgagcaggactgggccgatctcaagaaggtcttgccggtggcg
tcgggcggtatccatgctggccagatgcaccagctgctggaccttttcggcgacgacgtc
gtgctgcagttcggcggcggcacgatcgggcatcccatgggcatccaggcaggggccacc
gctaaccgggttgcgctggaagccatggtgctagctcgaaacgagggccgcgacatagcc
catgaaggccctgagatcctgcgggcggcagccaaatggtgcaagccgctggaagcggcc
ctcgatacctggggcaatatcagcttcaactacaccccgaccgacacgtcggatttcgtg
ccgagcgtaaccgcggcctga
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