Sinorhizobium medicae: Smed_3976
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Entry
Smed_3976 CDS
T00555
Name
(GenBank) helix-turn-helix-domain containing protein AraC type
KO
K07506
AraC family transcriptional regulator
Organism
smd
Sinorhizobium medicae
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smd03000
]
Smed_3976
Transcription factors [BR:
smd03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Smed_3976
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
ABR62785
UniProt:
A6UGK5
LinkDB
All DBs
Position
pSMED01:complement(427192..428202)
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AA seq
336 aa
AA seq
DB search
MVVGSCSLYPVTDSCESAARSGRVARQTGNRRPTPMALHQESNAVDSQGPIIRSITSGDI
SVTRVCSDRYDLKAAPATPCAEAFSVIVQLRDFEAHRLWKAGKLVYEGGHSRASLAITDL
RDRWQCHHLSPFDNIRFQIPFARMSAFAKQAGRNEYLGLASVQGRIDPVMYGLAQALLPS
LESPETASSLFLEQINLAVLAHLSQTYGGLHFPIGKKGTLAPWQERLATEFLANHFNKPF
SLGELARLCELSRSYFNKAFKESFGRTPSRWLSEYRTGRVKELLLQDVPIAEAAIACGFA
DQSHLTRVFTGLTGETPARYRRKNRCARPAMEQLSG
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggtagtgggctcctgctcattgtatccagtcacagatagctgcgaatccgcagcaaga
tcaggccgcgtagcgcgccaaaccggaaatcggagacccacaccgatggcccttcatcag
gaatcgaatgccgtggattcacaaggcccgatcatcagatcgatcacttccggcgatatt
tcggtgaccagagtctgttccgaccggtacgatctgaaagccgcaccggcgacaccctgt
gccgaagcattcagtgtgatcgttcaactgcgtgactttgaagcccatcgactgtggaag
gctggcaagctcgtttacgaaggcgggcactccagggcatctctggcgatcaccgatctg
cgcgatcgctggcagtgtcatcatctttcgccattcgacaatattcgctttcaaattcca
tttgcccgaatgagcgcctttgcgaagcaggccgggcggaacgaatatctggggcttgcc
tctgtgcaggggcgcatcgatcccgtgatgtacggacttgcccaggcgctgttgccgtcg
ctcgaaagtcccgaaactgccagttccctttttctggagcaaatcaaccttgccgtgctg
gcgcatctgagccagacatatggcgggctgcactttccgatcggcaaaaaggggaccctt
gcgccctggcaggaaagacttgcgacggaatttctcgcgaaccacttcaataaaccgttt
tcgcttggagagttggcacgcctttgcgagctgtcgcgcagctatttcaataaggctttc
aaggagagtttcgggcgcacgccatccaggtggctgagcgaatatcggaccgggcgcgtg
aaggagcttttgcttcaggatgtgccgatcgcggaagccgcaatcgcctgcggtttcgcg
gatcagagccatctgacgcgggtcttcactggtctgacgggcgagacgcctgcgcgctac
agacggaagaaccggtgcgcgcggccagcaatggagcagctctccggctga
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