Sinorhizobium medicae: Smed_4029
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Entry
Smed_4029 CDS
T00555
Name
(GenBank) extracellular solute-binding protein family 5
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
smd
Sinorhizobium medicae
Pathway
smd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Smed_4029
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smd02000
]
Smed_4029
Transporters [BR:
smd02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Smed_4029
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ABR62837
UniProt:
A6UGQ7
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All DBs
Position
pSMED01:complement(488012..489520)
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AA seq
502 aa
AA seq
DB search
MIIRYCTGALALFAATLLAGAAIAAEGEVKIVLPEQPANLDPCRSIRSDIGRIINSNITE
TLTVIDTEKGTVGPWLAEKWEQVDDLTWRVHLKSGVKFQDGVEFNAEAVVKSINRLMNPN
ITCDSRSKFGDVKLTPKAVDAQTVEISSDSPVPIMPTLLGTVQIVSPNMPFDKESNDPVG
TGPYVVESKSNEQIVLKRHDAYWGAKPDVTRATYVWRSESAIRAAMVESGEADMTPSIAV
QDATNAESDFAYLNSETTRMRIDAQIPPLDDVRIRKALNMAIDWDGMGEALFGKDVLRAS
QMVVPGVRGHNPDIKPWTYNPEEAMKLVEQAKADGAPVDKEIVLIGRNGFFPNSAESLEA
IRSMWQEIGLNVSIRQLEAADWVRYLDKPFPEGRGPTLFQQQHDNNTGDAGFTAPVMYLS
EGQYSTIADKDLDAVLKKAMAATGDEREKLFQEVFAKVHDEIVADVPMYHMIGYVRVGSR
LDWKPDLKTNSEIALSEIHFKD
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgatcatccgctattgtaccggcgccttggcgctatttgcagcgacgctgctcgctggc
gccgccatcgcagccgaaggggaagtgaagatcgtattgccggagcagccggccaatctc
gatccctgtcgctccatccggtcggatatcggccgcatcatcaattccaacatcaccgag
accctgaccgtcatcgatacggagaaaggcaccgttggcccctggctcgcggaaaaatgg
gagcaggtggacgatcttacctggcgcgtgcatctcaagagcggcgtcaagttccaggat
ggcgtggagttcaatgccgaagcggtggtcaagtccatcaatcgcctgatgaatccgaac
atcacctgcgacagccgctccaaattcggcgacgtcaagctgacgccgaaggcggtcgac
gcgcagacggtggagatttcctccgacagcccggtgccgatcatgccgacactgctcggc
accgtccagatcgtctcgccgaacatgcccttcgacaaggaaagcaacgatcccgtcggc
acgggcccctatgtggtcgaaagcaagtccaatgaacagatcgtgctgaagcgtcacgat
gcctactggggtgccaagccggacgtcacgcgtgcaacctatgtctggcgcagcgagtcg
gctatccgcgcggccatggtcgaatccggtgaagcggatatgactccgtccatcgcggta
caggacgcgaccaatgcagagtcggacttcgcctatctgaattccgagacgacacgcatg
cggatcgatgcgcaaatcccaccgctcgacgacgttcgtatccgcaaggccctgaacatg
gccatcgactgggacgggatgggcgaagcgctgttcggcaaggatgtgctcagggcgtcg
caaatggtcgttccgggcgtgcgcggacacaatcccgatatcaagccatggacctacaat
cccgaagaggcgatgaagctggtcgagcaggccaaggccgacggcgctccggtcgacaag
gagatcgtgctgatcgggcgcaacggctttttcccgaattcggctgaaagcctggaagcg
atccggtccatgtggcaggaaatcgggctcaacgtttcgatacgccagctcgaggcggca
gactgggtacgctatctcgacaagccttttcccgaagggcgcggcccgaccctgttccag
cagcagcacgacaacaataccggcgatgccgggttcaccgcgccggtcatgtatctgagc
gaggggcaatattcgacgatcgcagacaaggatctcgatgccgtcctcaagaaagccatg
gctgcgaccggcgacgagcgcgaaaagctcttccaggaggtcttcgcaaaggtgcacgac
gagatcgttgcagacgtgccgatgtaccacatgatcggatatgtccgcgtcggctcgcgc
ctcgactggaagccggatctcaaaacgaacagcgagatcgcgctctccgagattcacttc
aaggactga
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