Sinorhizobium medicae: Smed_4110
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Entry
Smed_4110 CDS
T00555
Name
(GenBank) Transketolase domain protein
KO
K11381
2-oxoisovalerate dehydrogenase E1 component [EC:
1.2.4.4
]
Organism
smd
Sinorhizobium medicae
Pathway
smd00280
Valine, leucine and isoleucine degradation
smd00640
Propanoate metabolism
smd00785
Lipoic acid metabolism
smd01100
Metabolic pathways
smd01110
Biosynthesis of secondary metabolites
smd01210
2-Oxocarboxylic acid metabolism
Module
smd_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
Smed_4110
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Smed_4110
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
Smed_4110
Enzymes [BR:
smd01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.4 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring)
Smed_4110
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Gene cluster
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Motif
Pfam:
Transketolase_C
Transket_pyr
E1_dh
Motif
Other DBs
NCBI-ProteinID:
ABR62917
UniProt:
A6UGY7
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All DBs
Position
pSMED01:574417..576495
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AA seq
692 aa
AA seq
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MTQAALKKDRRNAPDENIDWKRVVQLLLLSRELDEMEERRLVPEKKVLYQFSARGHDMAQ
ILLGLQLTGRHDAACGYYRSRPLLLALGVDPADALGSAMGRAGGYSDGRDIGVVFNYPNP
DGASALPMCGGVGSQYTPTAGWAQAITYFNQVLGNEEYREDIAVVLGGDGSVASNGFWSA
LTIATTQGLPLLFYIEDNGFGISVPSSFQTPEGNIAGNLAGWKNLTVLDGDGSDPAEAAR
LTKSAVERVREGRMPVLLRLEVPRLEGHSFQDTQAYKSEELVKSEWAHDPLPRLRDHLVP
AMLTAEEWNDAARAAKREAERARIEAESRPVADPETVTGNVFFEGRMQIMGGQHCAGYCP
PETTERATSAGERINMVTAIRRTLDHEMSVNERVVLFGEDIGAKGGVHAVTLGLQEKYGV
VRVFDTSLSEEGIIGRAVGMALAGLVPVPEIQFRKYAEPAIEQLNDCGTIRWRTSNRFAA
PIIVRMAGGFFKCGDPWHSQTNEVAFVHQPGWKIAVPSNAEDAVGLLRTALRGNDPVIFF
EHRAMLDHPWARRPYPGDAFGLPFGKAKFTREGGDITIVTWGAMVPRCEAAAEGISADVI
DLRSLMPWDSEAVIASVRRTRRCLIVHEDLGTAGFGAEIAAVVAQEAFIDLDAPISRLTM
PDIPSPHNPVLLDWVVPSPERIRKKINDLLEF
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaggccgcacttaaaaaggaccggcgcaacgcaccggacgagaacatcgactgg
aagcgtgtcgtgcagcttctgcttctgtcacgcgaactcgacgagatggaggaacgacgc
ctcgtccccgagaaaaaggttctctaccagttttcggcgcgcggccatgacatggcgcag
attctcctgggtctgcagctgacgggcaggcacgatgcggcttgcggctattaccgctcg
cgcccgctgctgcttgcactgggcgtcgatcccgccgacgcgctcggctcggcgatggga
cgcgcgggagggtattcagatgggcgcgatatcggcgtggtcttcaactatcccaatccg
gatggcgcctcggcgctgccaatgtgcggcggcgtcggcagccagtacacgccgacggcc
ggctgggcgcaggcgattacctatttcaaccaggttctcgggaacgaggaataccgggag
gacattgccgtcgtcctgggcggcgacggttcggtcgcctcgaacgggttctggtcggcg
ctgacgatcgcgacgacgcaaggcttgccgctgctcttctatatcgaagacaacggtttc
ggcatttccgtcccctcgagcttccagacgcccgagggcaacattgccggcaatctcgcc
ggctggaagaacctgaccgtcctcgacggcgacggctcggacccggcagaagcagcccgg
ttgacgaaaagcgcggtggaacgcgtacgtgaagggcggatgccggtgctgctccggctt
gaggtaccccgcctcgaagggcacagtttccaggatacccaggcctacaagagcgaggag
ctcgtgaagagcgaatgggcgcatgacccgctgccgcggctaagggaccatcttgtgccc
gcgatgttgaccgccgaggaatggaacgacgcggcgcgagccgcgaagagagaggcggag
cgggcgcgcatcgaggctgaatccaggcccgtcgccgatcccgagaccgtcaccggcaac
gtctttttcgaagggcggatgcagatcatgggcgggcagcactgtgccggctactgtccg
ccggaaacgacggagagggcgacaagcgccggtgagcggatcaacatggtgacggcgatt
cgccgcacgctagaccacgagatgtcggtgaacgagcgggtcgtcctctttggggaggac
atcggcgcgaagggcggcgttcacgcggtgaccctcggcctgcaggaaaaatatggtgtc
gtgcgcgtcttcgacacgtcgctttccgaggagggcatcatcggccgggcggtcgggatg
gctcttgcgggcctcgtgcccgtcccggaaatccagttccgcaaatatgccgagcctgca
atcgagcagctgaacgactgcggcacgatccgctggcgaaccagcaatcgtttcgccgcg
ccgatcatcgtgcggatggccggcggcttcttcaaatgcggcgatccgtggcacagtcag
acgaatgaggtcgccttcgttcaccagcccggctggaagatcgccgttccctccaatgcc
gaggatgcggtggggctgctgcgcaccgcattgcggggaaacgatccggtgatctttttc
gaacaccgggccatgctcgatcatccctgggcgcggcgaccctaccccggcgatgctttc
ggcctgcctttcggcaaggcgaagtttacgcgcgaaggcggcgacatcaccatcgtcacg
tggggtgccatggtcccgcgttgcgaagcggcggcagagggtatctccgccgacgtgatc
gatctgagaagcctgatgccctgggacagcgaggcggtcatcgcctcagtacgccgtacc
cgccggtgcctcatcgtccacgaggacctcggaacggcaggtttcggcgcggagattgcc
gccgtcgtcgcccaggaagccttcatcgatctcgatgcgccgatctcgcgcttgaccatg
cccgacattccgagcccccataatcccgtcctgctcgactgggtcgttccctcgccggaa
cggatacgcaagaagatcaacgaccttctggagttctga
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