Sinorhizobium medicae: Smed_4133
Help
Entry
Smed_4133 CDS
T00555
Name
(GenBank) glycoside hydrolase family 2 TIM barrel
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
smd
Sinorhizobium medicae
Pathway
smd00052
Galactose metabolism
smd00511
Other glycan degradation
smd00600
Sphingolipid metabolism
smd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
Smed_4133
09103 Lipid metabolism
00600 Sphingolipid metabolism
Smed_4133
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
Smed_4133
Enzymes [BR:
smd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
Smed_4133
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Glyco_hydro_2_N
Glyco_hydro2_C5
Glyco_hydro_2
Glyco_hydro_2_N2
DUF4982
Motif
Other DBs
NCBI-ProteinID:
ABR62938
UniProt:
A6UH08
LinkDB
All DBs
Position
pSMED01:complement(601177..603441)
Genome browser
AA seq
754 aa
AA seq
DB search
MRSVTSFNDSWVFSAGFTAADAGTLQAGQPIRLPHNAIELPFNYFDETCYQRAFTYQKVL
AWRPDFSGREVSLVFDAAMADAVVYLNGEEIVAHKDGYTPIEARLTGRLREGDNLITVKI
DGSENPEIPPFGGRIDYLTFAGIYRDVWLKITDPVSIANIKIETRDVLSDARTVSVRCDL
ANPQGLSFTGAVSALLKDAAGDVLAEVAGETAGGGVTVQMDGLKGLSLWDIDDPVLYEVE
VELRTGRGSDRVAAHFGFRTAEFTNEGFRLNGRLLKIRGLNRHQSFPYVGYAMGRTAQER
DAEIMKHTLHCNLVRTSHYPQSKWFLDHCDRIGLLVFEEIPGWQHIGGEAWKEEAILNVA
RMIERDWNHPSIVIWGVRINESQDSHDFYAKTNRLARELDPTRQTGGVRYITDSEFLEDV
YTMNDFILGNEELPGSNRPRTALRPQQECTGLSRKVPYLITEFGGHMYPTKIYDQEQRQA
EHVRRHLEVLNAAYGDPSISGAIGWCMFDYNTHKDFGSGDRICYHGVMDMFREPKFAAYV
YASQCDPSEEVVMKPVTFWARGERNIGGVLPLIVLTNCDEVELKYGSLVKRIGPDRENYP
HLPHPPVVIDHRHFTKDELGVWGMKWESAEFTGFIDGKPVAGRRMVADPVPTTLEIEADG
KTLRAGGRDSIRIMLRALDQAGNVLPFLNDAVAIEVHGPARVVGPTRLVFQGGSTGFWLE
STGAAGAIVVTAVSSRLGGVKLELVAMAEGEWNA
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgcgctctgttacttccttcaacgattcgtgggtcttctccgcgggcttcactgcggcg
gacgccggtacgctccaggcggggcagccgatcagacttccgcacaacgccatcgaactg
ccgttcaactattttgacgagacatgctaccagcgcgccttcacctatcaaaaggtcctc
gcctggcggcccgacttctccggccgcgaagtctcgctcgtcttcgacgcggcgatggcc
gatgcggtcgtgtatcttaacggcgaagagatcgtcgcgcacaaggacggctatacgccg
atcgaggcgcgcctgaccggcaggcttcgggagggcgacaatctcatcaccgtaaagatc
gacggtagtgagaacccggagataccgccgttcggcggccggatcgattatctcaccttt
gcaggtatctatcgcgacgtctggctcaagatcacggatcccgtttcgatcgccaatatc
aagatcgagacccgcgacgtgctctccgatgccaggaccgtctccgtccgttgcgaccta
gccaatccgcaaggcctttccttcaccggggccgtatcggcactcctcaaggatgccgcc
ggcgatgtgctggcagaggtggctggcgagacggctggtggtggcgtcaccgtccagatg
gacggcctcaaaggcctctccctctgggacatcgacgatccggtgctctatgaggtcgaa
gtcgaactcaggaccggccgagggtccgaccgcgtcgccgcgcatttcggtttccgcacc
gcggagttcacgaacgaaggctttcggctcaacggccgtctgctgaagatccgcggcctc
aaccgtcatcagtccttcccctatgtcggctacgcaatggggcgcaccgcccaggagcgc
gacgcggaaatcatgaagcacacccttcattgcaacctcgtccgcacgtcgcactacccg
cagtcgaagtggttcctcgaccattgcgaccgaattggcctgctcgtcttcgaggaaatt
ccaggctggcagcatataggcggcgaggcctggaaagaggaggcgatcctgaacgtggcc
cgcatgatcgagcgtgactggaaccatccctcgatcgtcatctggggcgtgcgcatcaac
gagtcacaggattcccacgacttctacgcgaagaccaaccggcttgcgcgcgagctcgat
ccgacgcggcagaccggcggcgttcgttacatcaccgacagcgagtttctggaagatgtc
tacacgatgaacgacttcatcctcggcaacgaggaactgccgggctcgaaccgcccgcgc
acggcgctccgcccgcagcaggaatgcaccgggctttcccgtaaggtgccctatctcatc
accgagttcggcggccatatgtatccgacgaagatctacgatcaggagcagcggcaggcc
gaacacgtgcgacggcatctggaggtgctgaacgccgcctatggcgatccgagcatttcc
ggcgcgatcggctggtgcatgttcgactacaacactcataaggatttcggctccggcgac
cgcatctgctatcacggcgtcatggacatgttccgtgaaccgaaattcgcagcctatgtc
tatgccagccaatgcgatccgtccgaagaagtggtgatgaagcccgtcactttctgggcg
cgcggcgagcgcaatataggtggcgtcctccccctgatcgtgctgacgaattgcgatgag
gtggaactgaaatacggttcgctcgtaaagcgtatcggcccggaccgggaaaactatcct
catttgccgcacccgcccgtcgtgatcgatcaccgtcacttcaccaaggacgagctcggc
gtctggggcatgaagtgggaaagcgctgaatttaccggcttcatcgacggcaagccggtc
gccggtcgccgcatggtcgccgaccccgttccgacgacactcgagatcgaggcggacgga
aagacgcttcgcgccggaggccgcgacagcatccgcatcatgctgcgcgcgctcgaccag
gccggcaacgtcctgcccttcctgaacgatgccgtggctatcgaggtgcatggtccggcg
cgggtcgtcggtcctacgcgcctcgtcttccaaggcggctccaccggcttctggctggag
tcgacgggagccgccggcgccatcgtcgttaccgcggtttcgtcgcgtctcggcggggtg
aagctcgagctcgtcgccatggcggaaggagagtggaacgcatga
DBGET
integrated database retrieval system
