Sinorhizobium medicae: Smed_4168
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Entry
Smed_4168 CDS
T00555
Name
(GenBank) helix-turn-helix-domain containing protein AraC type
Organism
smd
Sinorhizobium medicae
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cupin_6
HTH_18
HTH_AraC
Cupin_2
Cupin_3
Motif
Other DBs
NCBI-ProteinID:
ABR62973
UniProt:
A6UH43
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Position
pSMED01:complement(642350..643339)
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AA seq
329 aa
AA seq
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MLDHSSKTSSSASEDFLTELLRGLRLDGVDYVRCELTAPWGISFPAQETARFHFICGDCW
LRVADGDWIELKRGDAVLLPRGGEHALASMPGEKLAPLDAYSVQEVCHCVYNVCGGGRGE
TTILFCGSLRFNMDSMHPLLRMMPDVMRINALTASEPAIPHMLDAMAREVGASRVGSGGV
LARLADVLAALIIRSWVEHGCGNTSGWVAAVRHPGLGRVIAAMHLDPEKAWTVDSLARLM
GASRSGFAQQFASVVGETPARYLAQVRMHQARQWLTRDRMRISVVARRLGYDSEASFSRA
FKRVIGQPPSHYRGADPAEVSTFAGESRP
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaccattcgtccaaaacctcctcttccgcttctgaggattttctgaccgagctg
ttgcgcgggctccgtctcgacggggtggattacgtccgctgcgaattgacggcaccctgg
gggatctcatttccggcgcaggagacggcgcgcttccatttcatctgcggggattgctgg
ctgcgcgtcgccgacggggactggatcgagttgaagcgcggcgatgccgtgctcctgccg
cgcggcggcgagcacgcgctggcaagcatgccaggcgagaaactcgctccgctcgacgcc
tattcggtccaggaagtatgccattgcgtctacaatgtctgcggcggcgggcgcggcgag
accaccattcttttctgcggcagcctcaggttcaacatggattccatgcatccgctgctg
cgcatgatgccggacgtgatgcgaatcaacgcactgaccgccagcgagccggctatcccg
cacatgctcgacgccatggcgcgggaagtcggcgccagccgcgtcggttccggcggtgtc
ctggcgcggctcgccgacgtgctcgcggccctcatcatccgttcctgggttgaacacgga
tgcggcaataccagcggctgggtggcggcggtccgccaccccggcctcggccgggtcatc
gcggccatgcacctcgacccggaaaaggcctggaccgtcgactccctcgccaggctgatg
ggcgcctcgcgttccggcttcgctcagcaattcgccagcgtggtcggcgagacgccggcc
cgctaccttgcgcaagtgcgtatgcaccaggcacgtcagtggctgacccgcgaccgcatg
cgtatctcggtcgtggcacgtcgcctcggctatgattcggaagcctccttcagccgcgcc
ttcaagcgcgtgatcggccagccgccgagtcattatcgtggcgccgacccggccgaggtc
tccacattcgctggcgagagcagaccctga
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