KEGG   Sinorhizobium medicae: Smed_4176
Entry
Smed_4176         CDS       T00555                                 
Name
(GenBank) two component, sigma54 specific, transcriptional regulator, Fis family
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
smd  Sinorhizobium medicae
Pathway
smd02020  Two-component system
Brite
KEGG Orthology (KO) [BR:smd00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Smed_4176
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:smd02022]
    Smed_4176
Two-component system [BR:smd02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   Smed_4176
SSDB
Motif
Pfam: Sigma54_activat Response_reg AAA_lid_14 Sigma54_activ_2 AAA_5 HTH_8 Mg_chelatase AAA_2 RTP1_C2 AAA_16 AAA FleQ Zeta_toxin T2SSE
Other DBs
NCBI-ProteinID: ABR62981
UniProt: A6UH51
LinkDB
Position
pSMED01:complement(651820..653178)
AA seq 452 aa
MRAAPTVFLIDDDRDLRKAMQQTLELAGFTVSPFASAAEALGELTADFAGVVISDIRMPG
MDGLTLFRKVLALDPDLPMILVTGHGDIPMAVQAIQDGAYDFIAKPFAADRLVQSARRAE
EKRRLVMEIRALRRTAEAASEGLPLIGQTPAMERLRQTLKHIADTDVDVLVAGETGSGKE
VVATLLHHWSRRRSGNFVALNCGALPETVIESELFGHEPGAFTGAVKKRIGRIEHASGGT
LFLDEIEAMPPATQVKMLRVLEAREITPLGTNLTRPVDIRVVAAAKVDLGDPAERGDFRE
DLFYRLNVVTLSIPPLRERRDDIPLLFSHFLARAAERFGRDVPAIPSAVRDHLAAHSWPG
NVRELSHFAERVALGVEGTLGAAAAAPVSGGATLPERLERYEANILKEALTAHRGDVRET
LRALGIPRKTFYDKLQRHGINRTDYVKERGPA
NT seq 1359 nt   +upstreamnt  +downstreamnt
atgagagcagctccaaccgtgttcctgatcgatgacgaccgcgatcttcgcaaggcgatg
cagcagacactggagcttgcaggcttcaccgtctcgccctttgccagcgcggcggaggcg
ctcggagaactcaccgccgacttcgcgggcgtcgtcatcagcgatatccgcatgccgggg
atggacgggcttacgctgttccgcaaggttctggcgctggacccggatctgcccatgatc
cttgttaccgggcacggcgacataccgatggcggtgcaggcgatccaggacggcgcctat
gatttcatcgccaaaccctttgccgccgaccggctcgttcagagcgcaaggcgtgccgag
gagaaacggcggctcgtcatggaaatccgtgcgcttcgccgcacggccgaagccgcctcc
gagggcctgccgctgatcggtcagacgccggcgatggagcggctgcgccagaccctgaag
cacatcgccgataccgatgtcgacgtgctggtcgccggcgagacgggcagtggcaaggag
gtcgtggcgacgctgctgcaccactggagccggcgcaggagcggcaatttcgttgccctc
aattgcggcgctctgccggaaacggtgatcgagagcgagctcttcggccacgagcccggg
gcgtttaccggcgccgtcaagaagcgtatcggccggatcgagcatgcaagcggcggcacg
ctctttctcgacgaaatcgaggctatgccaccggcaacgcaggtgaagatgctgcgcgtg
ctcgaagcccgcgagatcacgccgctcggcacaaatctgacacgcccggtcgacatccgc
gtcgtcgccgccgccaaggtcgatctcggcgacccagccgaacgcggcgacttccgcgag
gatctcttctaccggctgaacgtggtaacgctctcgatcccaccccttcgcgaacgccgc
gacgacattccgctcctcttctcccatttcctcgcacgtgccgccgagcgcttcggccgc
gatgtgccggcgatcccatccgcggtgcgcgatcacctggcagcgcattcctggccgggg
aacgtgcgcgagctttcccatttcgccgagcgggtggcccttggggtagagggcactctg
ggcgccgccgcggccgcacccgtttcaggcggtgcgacgctgccggaaaggctggaacgc
tatgaagcgaatatcctaaaggaagcgctgacagcccatcgcggcgacgtcagggaaacg
ctgcgggccctcggcatcccccgtaaaaccttttacgacaagctgcagcgccacggcatc
aaccggacggactatgtcaaagaacgaggccccgcctga

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