Sinorhizobium medicae: Smed_4205
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Entry
Smed_4205 CDS
T00555
Name
(GenBank) transcriptional regulator, LysR family
KO
K02623
LysR family transcriptional regulator, pca operon transcriptional activator
Organism
smd
Sinorhizobium medicae
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smd03000
]
Smed_4205
Transcription factors [BR:
smd03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Smed_4205
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
SBP_bac_3
OpuAC
MarR
Motif
Other DBs
NCBI-ProteinID:
ABR63010
UniProt:
A6UH80
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Position
pSMED01:complement(687665..688615)
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AA seq
316 aa
AA seq
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MRNVIDARVKFRHLLTFVEVARQKSVVKAAELLHVTQPAVTKTIRELEEVLGVAVFEREG
RGIKITRYGEVFLRHAGAALTALRQGLDSVSQELSGGGPPIRIGALPTVSTRIMPGAITL
FLKEKTGARIKIVTGENAVLLEQLRVGDLDLVVGRLAAPDKMTGFSFEHLYSEQVVFAVR
AGHPLLSGKRAVFAHLSDYPVLMPTRASIIRPFVEQFLIANGIAGLPNQIETVSDSFGRA
FVRSSDAIWIISAGVVAADIADGMLSALPVDTSETRGPVGLTMRTDSIPSLPLSILMQTL
REAAEAAMAADTKKAL
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaacgtgatagacgctcgcgttaagtttcgccatctgctgacatttgtcgaggtc
gcgcgccagaagagcgtcgtgaaggcagccgaactcctgcatgtgacgcagccggcggtc
acgaagacgatccgcgagcttgaagaggttctgggcgtagcggttttcgagcgcgagggg
cgcggcatcaagatcacccgttacggcgaggtcttcctgcgccacgcgggcgctgcgctg
acggcgctgcggcaaggcctcgattccgtctcacaggagctgtccggcggcggtccgccg
atccgcatcggcgcacttccgacggtctccacccgcatcatgcccggcgccatcacgcta
ttcctgaaggaaaagaccggcgcacgcatcaagatcgtcaccggagaaaacgcagtcctt
ctcgagcaattgcgcgtgggagacctcgatctggtcgtgggcaggcttgccgcacccgac
aagatgaccggattttccttcgagcacctctattcggaacaggtggtcttcgcggtgcgg
gccggtcatccgcttctctccggcaagcgggcggtcttcgcacatctcagcgattatccg
gtgctgatgccaacccgcgcctcgatcatccgtcctttcgtcgagcaattcctgatcgcc
aacggcatcgccggcctgccgaaccagatcgagaccgtctccgactccttcggacgggcc
ttcgtgcgctcaagcgatgccatctggatcatatcggccggcgtggtcgctgcagatatc
gccgacggcatgctgtcggcgctgccggtcgatacgagcgagacgagaggacctgttggc
ctgaccatgcgcaccgattcgatcccgtcgctgccgctctcgatcctgatgcagacgctg
cgcgaagcggcggaagcggcaatggctgcagatacgaagaaggcgttgtag
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