Sinorhizobium medicae: Smed_4392
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Entry
Smed_4392 CDS
T00555
Name
(GenBank) transcriptional regulator, GntR family
KO
K03710
GntR family transcriptional regulator
Organism
smd
Sinorhizobium medicae
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smd03000
]
Smed_4392
Transcription factors [BR:
smd03000
]
Prokaryotic type
Helix-turn-helix
GntR family
Smed_4392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTRA
GntR
HTH_11
HTH_DeoR
HTH_36
HTH_Crp_2
Rrf2
HTH_24
Fe_dep_repress
HTH_29
HTH_27
RepL
Motif
Other DBs
NCBI-ProteinID:
ABR63196
UniProt:
A6UHR6
LinkDB
All DBs
Position
pSMED01:complement(887594..888367)
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AA seq
257 aa
AA seq
DB search
MARQENLPDERPIDRNHPDALYAQLRNLLRGMIERRELAVNDKLPSERELVAVYGVSRIT
VRQAIKELENLGYLQTRPGKGIYVTEPAPVYELEVVRSFTQTAHANNRKPGMRLLRAEIA
RADPEVARPLSLPTGAEVVFLERLRLLDGVPVVVQRDWFSASLTPGILDIDWTVENRSLY
DEFENRYGILPSRGQSTLSARLASDLEASLLQLDRPAAVLTLDQIAYDSHNRTVNISAAA
YHPTRYPLSLTQSHRRF
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atggcacgacaggaaaacctcccggacgaaaggccgatcgaccgcaatcatccggatgcg
ctttacgcgcaactgcgaaatcttctgagaggcatgatcgagcgtcgcgaattggcggta
aacgacaagctcccgtcggagcgggaactcgtggcagtttacggcgtcagccgcatcacc
gtgcgccaggcgatcaaggaactcgaaaacctcggttatctgcaaacgcggcccggaaag
ggtatctacgtaaccgagcccgctccggtctacgaactggaggtggttcgcagcttcacc
cagacggcccatgccaacaaccgaaagccgggcatgcggcttctcagggcggagatcgca
cgggccgacccggaagttgcgagaccgctttcactgccgaccggggcagaggtagtgttt
ctggaaagactccgcctcctcgatggggtgccggtggtcgtgcagagggattggttctcc
gcctcgctgactcctggcatcctcgacatcgactggacggtcgaaaacaggtcgctttac
gatgagttcgagaatcgctacggcatccttccgtcacgcggacaatcgacgctgagcgcg
aggcttgcatccgacctcgaggcctccctcctccagctcgatcggccggccgccgtgctg
acgctggatcagattgcctatgacagccacaaccgtaccgtaaacatcagcgccgcggcc
tatcatccgacccgctatccgctctcgctgacgcagtcgcaccgacgcttctga
DBGET
integrated database retrieval system
