Sinorhizobium medicae: Smed_4584
Help
Entry
Smed_4584 CDS
T00555
Name
(GenBank) MscS Mechanosensitive ion channel
KO
K22044
moderate conductance mechanosensitive channel
Organism
smd
Sinorhizobium medicae
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smd02000
]
Smed_4584
Transporters [BR:
smd02000
]
Other transporters
Pores ion channels [TC:
1
]
Smed_4584
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Motif
Other DBs
NCBI-ProteinID:
ABR63384
UniProt:
A6UIA4
LinkDB
All DBs
Position
pSMED01:1078743..1080836
Genome browser
AA seq
697 aa
AA seq
DB search
MGTGVGRVVAGFFLLLIFACATPTMAQEPATTPPGKVQQLMQLLDDPEVRGWIETKKTAP
EQAVKPSQGFAANWIAAIRGHLSGLVAAAPRVMPEWRAARERVSGDMQRQGSLPVIWAFA
VVLLIGYGAEFLLRYLLRRSANRNNAQGSGGFAAFVRIAPLVAFAVAAVAAFVFADWPRS
LEAAVAPLLIAWIVARLLIAIASAVLSPAIGGATAADAARPHVSLAPHVARYWLRRSVLF
ICTIAILWAILDMMRALAFPADVRELTSAVLGLIVLGLAVDTAWRRPVSEMAPARSVLRN
ASIVGFLILLWFFWIAGMEVLFWLGVYVLGLPPLLRFVSAATRTMLDAAAAEDFRVLRNV
LIERGARLVIIALAAVWLAMTFRISGAQMMQDDAFNRIFRGVLAGIVILLAADLIWQLAK
ESINVRIARASLTVEDPGELARNTRLRTLLPILRNFLAAFIAVVAGMMVLSGLGVEVGPL
IAGAGVFGVAIGFGSQTLVKDVISGIFYMMDDAFRVGEYIQSGSYKGTVESFSIRSVKLR
HHRGPVFTVPFGSLGAVQNMSRDWVIDKFLINVSYDADVAKVKKVVKGVGATLLEDPELA
PMIIETVKMKGVEQFGDYGISLSFAMKTKPGHQTQVRRRAQAMIKDAFKNNGIQFASPTV
QVAGDDAQSGSAAAAATRDAIAKKNAALAQGGEEAAE
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgggtacaggtgtggggcgtgtcgtagcaggcttttttctcctgctgatctttgcttgt
gcgacgcccacgatggctcaagagccggcgacgacgccaccgggcaaggttcagcaactc
atgcagttgctggacgaccccgaggttcgtggatggatcgagacgaaaaagaccgctccg
gagcaagccgtcaagccatcccaaggtttcgctgcaaactggatcgccgccatcaggggg
cacctttccggtcttgtggccgcggcgccgcgggtgatgcccgaatggcgggcggcgcgg
gaacgcgtgtcgggcgacatgcagcgccagggaagcttgccggtcatctgggcgtttgcg
gtggtcctcctgatcggttacggcgccgagttccttcttcgctatctcctgcggcgtagc
gccaaccgcaacaatgcgcaagggagcggagggttcgcggctttcgttcgcattgcaccc
cttgtcgctttcgcagtcgctgccgtcgccgcttttgtgttcgccgattggccgcgtagc
cttgaggcggcggtcgcgccgctcctgatcgcctggatcgtcgcccgcctgctgattgcc
atcgcttcggccgtgttgtcgcccgcgatcggaggtgccacggccgcggacgcagcaagg
ccgcatgtgtcgcttgctccgcacgtcgcccgttattggctcagaagatccgtactgttc
atctgcaccatcgcgatcctatgggctatcctcgatatgatgcgggcgcttgccttcccc
gcagacgtccgcgaactcacctccgcggtcctggggcttattgttcttggactggctgtc
gatacggcatggcggcgaccggtttccgaaatggcccccgcgcgcagcgttctgcgcaac
gcctcgatcgtcggtttcctgatcttgctctggtttttctggatcgcgggcatggaggtg
ttgttctggcttggcgtctatgtcctcgggctgccgccattgctgcgcttcgtcagcgcc
gcgacacggacaatgttggatgctgccgccgcggaggacttccgtgtgctgcgcaatgtt
ttgattgaacggggggcgaggctcgtcatcatagctctcgccgccgtgtggctagccatg
accttccgcataagcggcgcgcagatgatgcaggacgacgccttcaatcgcattttccgc
ggcgtgctggcgggtatagtgatactgcttgcggccgatctcatttggcagttggccaag
gaatccatcaacgtgcgcatcgcgcgcgccagcctgacggtggaggatccgggcgagctc
gcgcgcaacacgcgcctgcgcacgctgctgccgattttgcgcaatttcctcgcggccttc
atcgcagtcgttgccggcatgatggtgctgtcgggtctcggcgtcgaggtcggtccactg
atcgccggcgctggcgttttcggggttgccatcggcttcggttcccaaacgctcgtcaag
gacgtgatcagcggcatcttctacatgatggacgatgcctttcgtgtaggcgaatatatc
cagagcggcagctacaaagggacggtggaatccttcagtatccgttcggtcaaattgcgg
catcaccgggggccggtgtttaccgtgccctttggctcgctcggcgcggtgcagaacatg
agtcgcgactgggtcatcgacaagttcctgatcaatgtttcctacgatgcggacgttgcc
aaggtgaagaaggtggtgaaaggggtcggggccacattgctcgaggaccccgagctggcg
ccgatgatcatcgaaacagtaaagatgaagggtgtcgagcaattcggcgattacggcata
tccctgagcttcgcgatgaagaccaagccgggacaccagacgcaagtccgccgtcgtgcg
caggcgatgatcaaggacgccttcaagaacaatggcatccagttcgcctcgccgactgtt
caggtcgccggcgacgacgcgcaatccgggtctgcggcggcggccgcgacgcgtgatgcg
atcgccaaaaagaatgcggccctggctcagggtggggaggaagcggcggaatag
DBGET
integrated database retrieval system
