Sinorhizobium medicae: Smed_4628
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Entry
Smed_4628 CDS
T00555
Name
(GenBank) penicillin-binding protein 1C
KO
K05367
penicillin-binding protein 1C [EC:
2.4.99.28
]
Organism
smd
Sinorhizobium medicae
Pathway
smd00550
Peptidoglycan biosynthesis
smd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Smed_4628
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
smd01003
]
Smed_4628
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
smd01011
]
Smed_4628
Enzymes [BR:
smd01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
Smed_4628
Glycosyltransferases [BR:
smd01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
Smed_4628
Peptidoglycan biosynthesis and degradation proteins [BR:
smd01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
Smed_4628
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
BiPBP_C
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
ABR63426
UniProt:
A6UIE6
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All DBs
Position
pSMED01:complement(1130756..1132810)
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AA seq
684 aa
AA seq
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MPIALAVSALAAIALLWADRAFPPPLSEAATVSAEVLDRDGHLLRAFATEGGLWRLKTTV
EDVDPRFIEMLIAYEDQRFREHRGVDPLALGRAALQFLTNGRIVSGASTLSMQVARLIEP
RERRTLAAKFLQVARAIQIERRLDKDEILDLYLTRAPYGGNLEGVRAASLAWFGKEPRRL
SAGEAALMVALPQLPEKRRPDRNLAAAEAARKRVLARAAVAKVIGDGEAERAAMTAIPTR
RLQLPVHAAHLAEAARRKDPAALEHPTTLSRNVQRGLETVARESAVKLGSKVSIAMVMAD
IRTGEIVGEVGSANYFDASRSGWIDMTRITRSPGSTLKPFIYGLAFEEGLVSQETIVEDR
PADFFGYRPRNFDMSYQGDVSVRQALQLSLNVPAIRLLDAVGPSRLMVRFRRADIRPRLP
PHEAPGLAIGLGGVGITLRELVQLYAGLANHGIPVRLGNGVEGVPGPIDGEPLLSTVAAW
HVADILSDVLPPAGSRRRGIAYKTGTSYGYRDAWSVGFDGRYVLGVWAGRPDNGAVPGLT
GYGAAAPILFEGFVKAGIGTTPLPGPPAGAVRLAQADLPVSQRRFSINANGLLAASAREP
APQIVFPPEGAHVELSVRGQAAMSPLTLKLQGGRAPFRWLANGRPLPEATRRRVSRWLPD
GGGYSTLTVIDALGRAASVRVFVQ
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
gtgcctattgccctcgctgtatccgctctcgcagccatcgccctcttatgggccgacagg
gcctttcccccgcccctctccgaggctgcaacggtctcggccgaagtcctcgacagagac
ggccatctcctgcgcgcctttgcaacggaaggtggcttatggcggctgaagacaaccgtg
gaggacgtcgacccgcgcttcatcgagatgctgatcgcctatgaggaccaacgctttcgc
gaacatcgcggcgtcgacccactggcgcttggacgggcggcgctgcaattcctcaccaat
ggccgcatcgtttcgggtgcctcgacgctttccatgcaggttgcaaggcttatagagccc
cgcgagcggcggacgctggcagcgaagttcctgcaggtcgcgcgtgccattcagattgaa
cggcgtctcgacaaggacgagatcctcgacctctatctgacccgtgcgccctatggcggc
aacctcgagggcgtacgtgcggcaagcctcgcctggttcggcaaggagccgcgccgtctt
tcggcgggcgaggcggcactgatggtggcgctgccgcaattgccggaaaagcggcggccc
gaccgcaatctggcggccgccgaggcggcccgcaaacgtgtgctcgcccgcgctgcagtc
gccaaagtcattggcgatggagaagcggagcgagcggcgatgaccgccataccgacacgc
cgacttcagcttccagtccatgctgcccatctggcggaggcggcacgtcggaaggatccg
gcggccctggagcatccgacgacgctcagccgtaatgttcagcgggggctcgaaacggtc
gcgagagagagtgccgtaaagctcggctcaaaggtgtcgatcgccatggtcatggccgac
atcaggacgggcgaaatcgtcggagaggtcggctcggcaaactatttcgacgcaagccgg
tccggctggatcgacatgacgcggatcacccgctccccgggatcgacgttgaaacccttc
atctacggccttgcgttcgaagaggggctcgtcagtcaggagacgatcgtcgaagaccgg
ccggcggacttcttcggctaccgcccacgcaatttcgacatgagctaccagggcgatgtc
agcgtgcggcaggcgctgcaactttccctgaatgtgccggcgatccgcctgctcgacgcc
gtgggaccatcgcgactgatggtccgcttccgccgtgccgacatccggccgagactgccg
ccacatgaagcaccgggccttgcgatcgggctaggcggagtgggcatcacgcttcgcgag
ttggtgcagctctatgcgggcctggcaaaccacggcataccggtgcgcctgggcaacggc
gtcgaaggcgttcctggtcccatcgacggcgaaccgctcctgtcaacagtggcggcctgg
catgtcgcggacattctctccgacgtgctgccgcccgcgggaagccgtcggcgcggtatc
gcctacaagaccggcaccagctacggctatcgcgacgcctggtccgtagggttcgacggc
cgctatgtgcttggtgtctgggccggcaggcccgacaatggcgcggtgcccggtctcacc
ggttacggtgcggccgccccaatccttttcgagggttttgtcaaggccgggattgggacg
acgccgctgcccggcccgccggcgggtgctgtccggcttgcccaggccgatctgccggtc
agccagcggcggttctccatcaatgcgaacggtctgcttgcagcctcggctcgggagccg
gctccacagatcgtgttcccgcccgagggtgctcacgtagagctcagcgtaaggggccag
gcagcgatgtcccccttgacgctaaagctccagggcggtcgggcccccttccgctggctg
gccaatggtcgtccgctacccgaggcaacgcgccggcgggtcagccgctggctgccggat
ggcggcggctactcgacactcaccgttatcgacgcgctcggtcgggccgccagtgttcgc
gtcttcgtccagtga
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