Sinorhizobium medicae: Smed_4682
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Entry
Smed_4682 CDS
T00555
Name
(GenBank) ABC transporter related
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
smd
Sinorhizobium medicae
Pathway
smd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Smed_4682
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smd02000
]
Smed_4682
Enzymes [BR:
smd01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
Smed_4682
Transporters [BR:
smd02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Smed_4682
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_22
AAA_16
SMC_N
AAA_29
ABC_ATPase
AAA_5
AAA_23
RsgA_GTPase
DUF87
MMR_HSR1
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ABR63479
UniProt:
A6UIJ9
LinkDB
All DBs
Position
pSMED01:1197145..1198938
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AA seq
597 aa
AA seq
DB search
MRRFLLPGLEVLRGALGRQMRLLPAVVILGLTSAALEGAGIGLIIPMLSIIAGDEQATGL
SGISAYFQGMGEGLDDGERLLAISVAVLALILLKNVLSFANTLLTTFIYGKASHSVRSAL
SDQLLRIGYPFFMQHNPGRLLNIISNESWRASDAIQTVLAAIVHGSAALILLAFLLLMSW
QMTLFVALGLVLVQLAHAALSATLKGPSRHVTSFNSELSARMLHLVHAGRLIRVFGQEPR
EKQAFDSASDAVRRAGFVLQSRQGALPPLTEVLHSALFLAVVVSAWSVGVSFPVIVAFVV
LLYRLQPHVRALQMSWSQIQGWSGSLEEVRWLLDSSDKPKPPEGKTPVDGLHEILVFDRV
TFRYPGSEVRPVVLRSASFEIRSGRSTAIIGRSGAGKTTIVNLLCRFVEPDEGCILVDGV
PLSEIDPIQWRRQIAVASQDLELVDGSILENITYGQSATFAEAERAAKLAEAHGFIEQLP
QGYQTVVGYRGASLSAGQRQRIALARALVRDPAILILDEATNAVDGLSEAAIVETLRLRA
GRRTTIVISHHRSTISFCDDLVVLGSGHVKGQAALADVASLSMDQLYEHETRADSAT
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgcgtagattcctattgccaggtctcgaagtccttcgcggcgcgctagggcgccaaatg
cgcctgcttccggccgtcgtcattctcggccttaccagcgctgcgctcgaaggcgccggc
atcgggctcatcatacctatgctgagcatcatcgccggagacgagcaggccaccggcctg
agcggcatctccgcttatttccaggggatgggggagggccttgatgacggcgagcgcctg
ttggcgatttcggtagcggtgctggctctgatcctcctcaagaacgttctttccttcgcc
aacacgctgctcacgaccttcatatacggcaaagccagccactccgtccgcagcgcgctc
tcggatcagctgctgcggatcggataccccttcttcatgcagcataatccgggccggctg
ctcaacatcatatccaatgaatcgtggcgcgcgtccgacgcgatccagacggtgctcgcc
gcgatcgtacatggctcagccgcgctgatccttctcgccttcctgttgctcatgtcgtgg
cagatgacgctgttcgttgcgctcggccttgtcctcgtccagcttgcgcatgcggccctt
tcggcgacgctcaagggcccgagccgccatgtcacttccttcaacagcgagctttccgcc
agaatgctgcatctggtgcacgccgggcggctgatccgtgtcttcggtcaggaaccgcgc
gagaagcaggcattcgattcggcctcggacgccgttcgccgggccggcttcgtgctgcaa
tcacgacagggtgcgctgccgccgctcaccgaagttctccattcggcgctttttctcgcg
gtggtggttagcgcctggtccgtcggcgtcagctttccggtgatcgtcgccttcgtcgtc
ctgctttaccgcctgcagccgcatgtgcgcgccctgcagatgtcctggagccagatccag
ggctggagcgggtcgctcgaagaggtgcggtggcttctcgactcgtccgacaagccgaag
cctccggagggcaagactccggtcgacggcctgcacgagatcttggtgttcgatcgggtg
accttccgttatccaggttccgaggtgcggccagtcgttttacgttccgcgagcttcgaa
atccgcagcggtcgttcgacggcgatcatcggtcgttcaggcgcgggaaagaccacgatc
gtcaatcttctgtgccgtttcgtcgagccggatgaaggatgcatcctcgtcgacggggtg
cctctgagtgagatcgatccgatccagtggcggcgccagatcgccgtcgccagccaggat
ctcgaactggtggacggcagcattctggaaaacatcacctatggtcagagcgccaccttc
gcggaagcggaacgcgccgcgaagctcgccgaggcccacggcttcatagagcagctgccg
cagggctatcagacagtcgtcggttacaggggggccagcctctcggcagggcagaggcag
cgcatcgcgcttgccagggccctcgtgcgcgatccggcgatcctgatcctagacgaggca
accaatgcggttgacggcctgtcggaggcagcgatcgtcgagacgctgcgattaagagcc
ggcagacgcacgacgatcgtgatcagccatcacaggagcacgatctcgttttgcgacgac
ctcgtggtccttggttccgggcacgtgaagggtcaggccgcactggccgacgtcgcgtcg
ctcagcatggatcagctatacgagcatgagacgcgcgcggacagcgcaacgtaa
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