Sinorhizobium medicae: Smed_4996
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Entry
Smed_4996 CDS
T00555
Name
(GenBank) Capsule polysaccharide export protein-like protein
KO
K10107
capsular polysaccharide transport system permease protein
Organism
smd
Sinorhizobium medicae
Pathway
smd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Smed_4996
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smd02000
]
Smed_4996
Transporters [BR:
smd02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Capsular polysaccharide transporter
Smed_4996
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MscS_porin
Pox_A_type_inc
ATG16
KIF9
FOXP-CC
Motif
Other DBs
NCBI-ProteinID:
ABR63777
UniProt:
A6UJE7
LinkDB
All DBs
Position
pSMED01:1510238..1511569
Genome browser
AA seq
443 aa
AA seq
DB search
MAASKDAAVNKADSAQAAGKDVSATAAAKSKGIAVLEGLLGKESAPVIPLPGRQKAFPPK
KTGWKAGWLKKLRWRHAIIGGTFLGLVAVPATLASLYMAFIAADQYHSTTSFAVRSIEGG
VSSDILGMFTQASGGSTVSDSYILMDYILSERMAADADRRFKLEDVYATRGLDYFYGIGS
ELPIEDKLDYWRDMVNVNFDHASGIMQVTVKAFEPRQAREIAKFIVDQSDNLVNSLSLSA
RNDVLRAAQDEVLAGEARLSKARAALRDYRDKSQEISPEEGAKLAVQLIGSLEQQLTQLN
ADLATAKSQMGEDTPRIRVLKTRIESLEQQLDVERQRLGAGEKSAAGNDPNSPDVAGRIA
EFEELETEREFAERAYTAALGSLEKARIDANNRQRYLALFIEPTLSELAQYPARLLNSFL
VMLGLLFAWGIGVMGYYNIRDRA
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaagcaaagacgcggctgtgaacaaggctgattccgcgcaagccgccgggaag
gacgtgtcggcaacggccgcggcgaaaagcaagggcatagcggttctcgaagggcttctc
ggcaaggaaagcgcgccggtcatccccctgccgggacgccaaaaggcctttccccccaag
aagacaggctggaaagccggctggctcaagaagctccgctggcgtcacgcgatcatcggc
ggcaccttcctgggtcttgttgccgttcccgcgacgcttgcttcgctctacatggccttc
atcgccgccgaccagtatcacagcaccacgtcttttgccgtgcgcagcatcgagggcggc
gtttcaagcgacatcctgggaatgttcacacaggcatccggcggcagcacggtttcggat
agctatatcctcatggattatatcctgagcgagcgcatggcggcggacgcggaccgccgg
ttcaagctggaagacgtctacgcgacgcgcggactggactatttctacggtatcggctcc
gaattgccgatcgaggataagctcgactattggcgcgacatggtgaacgtcaatttcgac
cacgcctccggcatcatgcaggtaaccgtcaaggcctttgaaccgcggcaggcgcgtgag
atcgcgaaattcatcgtggaccagagcgacaacctcgtgaacagcctctcgctctccgcc
cgcaacgacgtgctgcgtgcggcgcaggacgaagtgcttgcgggcgaagcgcggctttcc
aaagcgcgcgcggcactgcgcgactatcgcgacaaatcgcaggaaatcagtccggaagag
ggggcaaagcttgccgttcagctcatcggatcgctggagcagcagctgacgcagctcaat
gccgatcttgcgacggccaagagccagatgggcgaagacacgccccgaatccgtgtcctc
aagacgcgcatagagagcctggagcagcagctcgacgtggagcgccaacgcctgggcgcc
ggcgaaaagtccgcggccggaaacgaccccaattcaccggatgtcgcgggtcgcatcgcc
gagttcgaggaattggagacggagcgcgagttcgcggaacgtgcctatacggcagcgttg
ggatcgctggagaaggcacgcatcgacgcaaacaaccgccagcgctatctggcacttttc
atcgagccgacgctttcggaacttgctcagtatccggcgcgcctgctgaactcgtttctg
gtgatgctgggactactatttgcctggggcatcggcgtgatgggatattataacatccgc
gatcgggcgtag
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