Sinorhizobium medicae: Smed_5075
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Entry
Smed_5075 CDS
T00555
Name
(GenBank) putative transcriptional regulator, AsnC family
KO
K03719
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
smd
Sinorhizobium medicae
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smd03000
]
Smed_5075
03036 Chromosome and associated proteins [BR:
smd03036
]
Smed_5075
Transcription factors [BR:
smd03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
Smed_5075
Chromosome and associated proteins [BR:
smd03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
Smed_5075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_AsnC-type
HTH_24
NirdL-like_HTH
MarR
MarR_2
HTH_11
HTH_23
DUF6627
HTH_Crp_2
GYD
LexA_DNA_bind
DUF7343
HTH_Cmi2_C
Motif
Other DBs
NCBI-ProteinID:
ABR63854
UniProt:
A6UJM4
LinkDB
All DBs
Position
pSMED02:complement(21887..22372)
Genome browser
AA seq
161 aa
AA seq
DB search
MSRSVQPPQLDAFDRKILAILQRDNTTPQRTIGEAVNLSAPAVQRRIKRMTKEGVIQANA
AIVDPMAIGQSVTIFVEVEVISETAAQIEEAKRAFASEPEIQQCYYVTGEADFILVIIVP
TMGDYEALTRRLFFGNNNVKRFRTFVAMDRVKVGLNIPVEA
NT seq
486 nt
NT seq
+upstream
nt +downstream
nt
ttgagcagatccgttcagccaccgcagctcgatgctttcgaccggaaaattcttgcgatc
cttcaacgcgataacaccacgccgcagcgaacgatcggtgaggccgtcaatttgtccgcg
ccggccgttcagaggcggatcaagcggatgacgaaagaaggcgtgatccaggccaacgcg
gccattgtcgatcccatggccatcggccagtccgttaccatcttcgtggaggtggaggtc
atcagcgagacggctgcgcagatcgaggaagcgaagagggcattcgcctcagagcccgag
atccaacagtgctactatgtcaccggcgaggctgatttcattctcgtgatcatcgttccg
acgatgggcgactacgaggcactgacccggcgcctcttctttggcaacaacaacgtcaag
cgcttccggacgtttgtggccatggaccgcgtcaaggtcggattgaatattccggttgaa
gcctga
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integrated database retrieval system
