Sinorhizobium medicae: Smed_5134
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Entry
Smed_5134 CDS
T00555
Name
(GenBank) TRAP dicarboxylate transporter-DctP subunit
KO
K11688
TRAP-type transport system periplasmic protein
Organism
smd
Sinorhizobium medicae
Pathway
smd02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Smed_5134
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smd02000
]
Smed_5134
Transporters [BR:
smd02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Smed_5134
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
Chalcone_3
MAS20
IMP_cyclohyd
Motif
Other DBs
NCBI-ProteinID:
ABR63911
UniProt:
A6UJT1
LinkDB
All DBs
Position
pSMED02:87054..88058
Genome browser
AA seq
334 aa
AA seq
DB search
MSSFRRKLTTSAVAATWSLIASTAGAQTVLKASHQFPGGKGDIRDEMVQLIAREVAAANV
GLEIQVFPGSSLYKPNDQWNAVTRGLLDMTSFPLDYASGRHPEFSATLMPGLVGNFDRAM
RLNDSEFMGDIKKVIEDAGALVIADAWLSGAFASKKSCITSPDTIKGQVIRAAGPAFEEM
LVEAGASISSMPSSEIYTGMQTGVLDAANTSSASFVSYRLFEQAKCLTAPGENALWFMYE
PVLVSKRVFDGLTEEQQKAMLAAGEKAEAYFNEEVRKGDQVMIDTYKKAGVEVVEMSKED
YDAWLALAKKSSYKNFAANVTDGDKLIEKALAVK
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgagcagttttcgacggaagttgacgacttccgcagtcgcggcgacctggagcttgatc
gcatcgacggcgggcgcccagaccgtgctcaaggcatcgcaccagtttcccggcgggaag
ggtgacattcgcgacgagatggtgcagttgatcgcccgcgaggtcgccgccgccaatgtc
ggcctcgagatccaggttttcccaggttcatcgctgtacaagccgaatgatcagtggaat
gcggtcacacgtggcctgcttgatatgacttcgtttccgctggactacgcttcgggccgc
catccggaattctccgcaacgctcatgcccggccttgttggcaatttcgatcgcgcgatg
cggctgaacgattcggagttcatgggagacataaagaaggtcatcgaagatgccggcgct
ttggtgatcgccgatgcgtggctctccggtgcattcgcttcgaagaagagttgcatcaca
tctcccgacaccatcaagggacaggtgatccgcgccgccgggccggccttcgaggagatg
cttgtggaagccggcgcctcgatttcatccatgccttcgtcggaaatctacaccggcatg
caaacgggcgttttggatgccgcgaatacatcgtcggcgagtttcgtgtcctatcgactg
ttcgaacaggcaaagtgcctgacggctccgggagaaaatgccctctggttcatgtacgaa
ccggtgctggtctccaagcgcgtcttcgacggcctgacggaagagcagcaaaaggcgatg
ctcgctgcaggcgagaaagcagaggcctacttcaacgaagaggtccgcaagggcgatcag
gtcatgatcgatacctacaagaaggcaggcgtcgaagtcgtcgagatgtcgaaggaggat
tacgatgcctggctcgcgcttgccaagaagtcttcctacaagaactttgccgccaacgtc
accgacggcgacaagctgatcgaaaaggcgttggccgtgaagtaa
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