Sinorhizobium medicae: Smed_5167
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Entry
Smed_5167 CDS
T00555
Name
(GenBank) 4-phytase
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
smd
Sinorhizobium medicae
Pathway
smd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Smed_5167
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smd02000
]
Smed_5167
Transporters [BR:
smd02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Smed_5167
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
CBP4
Motif
Other DBs
NCBI-ProteinID:
ABR63944
UniProt:
A6UJW4
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All DBs
Position
pSMED02:complement(119261..120853)
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AA seq
530 aa
AA seq
DB search
MLKRLTLAAMLSLGVAGGALAAGERHGGTLVFTAPYGSSFATLDVQSSPNTQEEFITQAI
HRALYSWDAVQNKPVLELATSEDVSEDGTVHTYHLRENAVFHNGKPLTADDIIYSYKRIA
NPKNAFPGASFIAVIKGAEDYTAGKADEISGLKKIDDHTLEITYASTINPGFPLMQNTTV
IYPSDVEDEAEFGKNPVGLGAFVFKEHVPGSRLVVEKFDKYYEEGKPYLDRINIVLMAED
AARDIAFRNKEIDVSILGPTQYQAYQGEDGLKDHLLEVAEVYTRNIGFNPAFEPFKDRRV
RQAINHAINAPLIIERLVKSKAYPASGWVPISSPAFDNDKAPYAYDPDKAQALLAEAGYA
DGFEFEVTASPNESWGVPIVEAILPMLKKVGITVKPKPVESSALGEAVTTNNFQAFIWSN
LSGPDPLNALRCYYSKTPQSACNYTSYASPEFDKLYEAAKQERDPAKQNDLLRQANNIVQ
DDAPVWFFNYNKAVIAYQPWVHGLVPNATELAIQPYDEIWIDDKAPASRQ
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaagacttacactggcggcaatgctcagcctcggcgtggctggcggggcgctt
gcggcgggcgaacgccacggcgggacccttgtcttcaccgccccctacggttcgagcttc
gccacgctcgacgtgcagtcgagccccaacacgcaggaagaattcatcacccaggccatc
caccgcgcgctctacagctgggacgcggtccagaacaagccggtgctggaactggcgacc
tcggaagacgtttccgaggacggcacggtccacacctatcacctgcgtgaaaacgccgta
ttccacaacggcaagccgctgacagccgacgacatcatctacagctacaaacgaattgcc
aatccgaagaacgcctttcccggcgcgagcttcattgcggtcatcaagggggcggaggac
tataccgccggcaaggcagacgagatttcgggtctgaagaagatcgacgatcacacgctg
gagatcacctatgccagcacgatcaatcccggcttcccgctgatgcagaacacgactgtc
atctatccgtccgatgtcgaggacgaagcggagttcggcaaaaaccccgtcggcctcggc
gctttcgtcttcaaggagcacgtacccggctcccggctcgtcgtggaaaagttcgacaaa
tattatgaggagggcaaaccctatctcgaccgcatcaatatcgtgttgatggccgaggac
gccgcgcgcgacatcgccttccgcaacaaggagatcgatgtttcgattctcgggcccacc
cagtaccaggcctatcagggcgaggacggattgaaggatcacctcctggaggtcgcagag
gtctatacccgtaatataggcttcaatcccgccttcgaacccttcaaggacaggcgggtg
cgccaggcgatcaaccatgccatcaacgcgccgctgatcatcgagcgcctggtcaagagc
aaagcctatcccgcctcgggatgggtgccgatttcctcgccggccttcgacaacgacaag
gcgccctacgcctacgatccggacaaggcgcaggcgctgctcgccgaggccggctacgcg
gacggcttcgaattcgaggtgacggccagcccgaacgaaagctggggcgtgccgatcgtc
gaagccatcctgcccatgctgaagaaggtcggcatcaccgtgaagccgaagccggtcgaa
agctcggcactcggcgaggcggtgacgaccaacaacttccaggccttcatctggtcgaac
ctttccggcccggatccgctgaacgcgctgcgctgctactattcaaagacgccgcaatcc
gcctgcaactacacgagctatgcgagcccggaattcgacaagctctatgaggcggccaaa
caggagcgtgacccggccaagcagaacgatctcctgcgccaggccaacaatatcgtgcag
gacgacgcgccggtctggttcttcaactacaacaaggcggtgatcgcctaccagccgtgg
gtccacggcctcgttccgaacgcgacggaactggcgatccagccctatgacgagatctgg
atcgacgataaggcaccggcctcgcgccagtaa
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