Sinorhizobium medicae: Smed_5169
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Entry
Smed_5169 CDS
T00555
Name
(GenBank) transcriptional regulator, LysR family
KO
K21645
LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
Organism
smd
Sinorhizobium medicae
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smd03000
]
Smed_5169
Transcription factors [BR:
smd03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Smed_5169
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Paralog
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
Motif
Other DBs
NCBI-ProteinID:
ABR63946
UniProt:
A6UJW6
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Position
pSMED02:122720..123661
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AA seq
313 aa
AA seq
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MEIKWLEDFVTLADTSSFSRAAELRNVTQPAFSRRIKQLENWLGATLISRATMPAELTPA
GRNFLPVAQESIRTFYAAREVLRLPNEPGLIRFAALHTLTVTFFPRWLKKLEAAGGTFST
SLIPDRGGIEANLDALIGDEADFFLTYAHAEVPFHLARGQFASLTVAHDRLIPLVATEIV
LSGHAQPGRNLLDRAVAQPRLAIPYLSYGLNSFFGVALSRLLLRRPPFRRRTTHENTISA
GLMNMALTGAGLCWLPESLAREEMEAGRLVPASADEGWNLDLEIRLYRHAAGRNRKVEDL
WQTAQQLLERSPA
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggagatcaagtggctggaggatttcgtgacgcttgccgacacgtccagcttctcgcgt
gcggctgagctgcgcaacgtgactcaaccggccttcagccgccggatcaagcaattggag
aactggctcggcgcgacgctgatcagccgcgcgaccatgccggccgaactcacgcctgcc
gggcgcaatttcctgcccgtcgcccaggaatcgatccgtaccttctatgcggcgcgcgaa
gttctgcgtcttccgaatgagccgggcctcatccgcttcgccgcgctgcatacgctgact
gtcaccttctttccgcgctggctgaaaaaactagaggctgcgggcgggacattcagcacc
tcgctcattccggaccgaggtggcatcgaggccaacctcgacgcactcattggcgacgag
gcggatttcttcctcacctatgcccatgcggaagtgccgttccatctcgcccggggacag
ttcgcctcgctgaccgtggcccatgaccgtttgatcccgctggtcgcaacggagatcgtg
ctgtccggccatgcacaacccggtcgcaacctccttgaccgtgccgtcgcccagccgcgg
cttgccatcccttatctcagctatggcttgaattctttctttggcgttgccctttcgcgc
ctgctgctgcgccgtccgccattccggcgccgcacgacacacgaaaacaccatcagcgcc
ggcttgatgaacatggcattgacgggcgcaggcctgtgctggcttccggaaagtctcgcg
cgtgaggagatggaggcaggccgcctcgtgcccgcctctgcggatgaaggctggaacctc
gacctcgagatccggctctaccgccacgcggcgggccgcaaccgcaaggtcgaggatcta
tggcagacggcgcagcagctcctggagcgctcgcccgcttga
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