Sinorhizobium medicae: Smed_5196
Help
Entry
Smed_5196 CDS
T00555
Name
(GenBank) Lysine decarboxylase
KO
K01584
arginine decarboxylase [EC:
4.1.1.19
]
Organism
smd
Sinorhizobium medicae
Pathway
smd00330
Arginine and proline metabolism
smd01100
Metabolic pathways
smd01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
Smed_5196
Enzymes [BR:
smd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
Smed_5196
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
ABR63973
UniProt:
A6UJZ3
LinkDB
All DBs
Position
pSMED02:complement(153240..155510)
Genome browser
AA seq
756 aa
AA seq
DB search
MEFYKAFPIAVIDEDYEGKNAAGRGMRSLAEAIEKEGYRVVGGLTYEDARRLVNVFNTES
CWLISVDGAESSTTRWEILAELLAAKRSRNNLLPIFLFGDDTTAEMVPAPVLRHANAFMR
LFEDSPEFMARAIVRAAQNYLERLPPPMFKALMEYTLHGAYSWHTPGHGGGVAFRKSPVG
QLFYAFFGENTLRSDISVSVGSVGSLLDHVGPIGEGERNAARIFGADETLFVVGGTSTAN
KIVWHGMVTRNDLVLCDRNCHKSILHSLIMTGATPIYLTPSRNGLGIIGPIAKEQFTPEA
IAQKIAASPFAGETNGKVRLMVVTNSTYDGLCYNVDGIKAALGDAVEVLHFDEAWFAYAN
FHEFYDGYHAISSTKPARSQEAITFATQSTHKLLAAFSQASMLHVQHAEAKQLDITRFNE
AFMMHTSTSPQYGIIASCDVAAAMMEQPAGRALVQETIDEAMSFRRAVNAVRTQMQDSWW
FEVWEPPIADRAPSDAKSDWVLKPGDAWHGFEDLAENHVMVDPIKVTILSPGLNAGGTML
EHGIPAAVVTKFLSSRRIEIEKTGLYSFLVLFSMGITRGKWSTLITELLNFKDLYDANAP
LSRALPALAAAHPDVYRTMGLRDLCEKIHDVYRSDDVPNAQREMYTVLPEMALRPADAYN
RLVKGCVESIDIDELIGRTLAVMIVPYPPGIPLIMPGERITAATRSIQDYLVYARSFDKK
FPGFETDIHGLRFVANPSGRRYLVDCIVEEGQDDTA
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atggagttctacaaggcattccccatcgctgtcatcgatgaagattacgagggtaaaaac
gctgccgggcggggcatgcgcagcctcgcagaggcgattgaaaaggaaggttatcgggtc
gttggaggcctcacctatgaggatgcacgccgcctcgtcaacgtcttcaacaccgagtcc
tgctggctgatttcagtcgacggggcggaatcaagtacgacgcgatgggagattttagcc
gagctgctcgccgcgaaacgctcccggaacaacctgctgccaatctttctgtttggcgac
gatacaacggcggaaatggtgccggcgcccgtgctgcgccacgccaatgccttcatgcgt
ctcttcgaggattctccggaattcatggcgcgcgcaatcgtgcgcgcggcgcagaattat
ctggagaggcttccgcctccaatgttcaaggcgttgatggaatacacgcttcacggcgcc
tattcctggcacacgccagggcacggaggcggggtggcatttcgcaagagcccggtgggg
cagctcttttatgcgtttttcggagagaacacattgaggtcggacatttctgtgtccgtc
ggcagcgttggttcgctcctcgatcatgttgggccgattggcgagggtgagcgcaatgct
gcgcgcatatttggtgcggacgagacgctgttcgttgtcggcggcacatcgaccgccaat
aagatcgtgtggcacggtatggtcactcgcaacgacctcgtcctctgcgaccgaaactgc
cataaatcgatcctgcactcgctgatcatgacgggtgcgacgccgatttacctgacgccc
tcacgcaacggcctcggcatcatcggcccaattgcgaaggagcagtttaccccggaggca
atcgcgcagaagatcgccgccagtccgtttgccggtgagacgaacggtaaagtgcgcctg
atggtggtgacaaactccacatatgatgggctctgctacaacgtagatggaatcaaagcg
gcgctcggcgatgcggtggaggtactgcatttcgacgaggcctggtttgcttacgccaat
tttcacgaattctacgatggttatcacgcgatctcttcgacgaagcccgcgcgttcgcaa
gaagccataacattcgcaacccagtcgacgcacaagctgctggccgccttctctcaagct
tcaatgcttcatgtgcagcatgccgaggcgaagcaactcgacatcacacgcttcaacgaa
gcgttcatgatgcacacatcgacatcgccgcaatatgggatcatcgcctcgtgcgacgtg
gctgctgccatgatggagcagccggccgggcgggcgctggtacaggagaccattgacgag
gccatgagtttccgccgagccgtcaatgcggtgcggacacagatgcaggattcctggtgg
ttcgaagtctgggagccccccatcgcggatcgggcaccgagcgacgccaagtcggattgg
gttctaaagcccggtgatgcgtggcatggcttcgaagacctagctgagaatcacgtgatg
gttgaccctatcaaggtcacaatcctttcgcccgggctcaatgcgggcggaacgatgctg
gagcatggtattccggccgcagtcgttacgaagttcctttcttctcgccggatcgaaatc
gagaaaaccgggctctactctttcctggtgctcttctccatggggatcacaaggggcaag
tggagcaccctgatcaccgagctcttgaacttcaaagacctctatgatgccaatgcccct
ctttcacgcgcccttcccgccctcgcggcagcccatccggacgtctaccggacaatgggc
ctcagagatctttgcgagaaaattcacgacgtgtaccgcagcgacgacgtgccgaatgcc
cagcgcgagatgtacaccgtgctgcccgaaatggcactgcgcccggcggacgcctacaac
cgtctggtcaaggggtgcgtcgagagcattgatatcgacgaactgatcggccggacactc
gcagtcatgattgtaccctatccgccgggaatcccgctcatcatgcctggtgagcggatc
accgccgccaccagatcaatccaggactatctcgtctacgcccggagtttcgacaaaaaa
ttcccgggatttgagacagacatccacggactccgtttcgtcgcgaacccgagtggacgg
agatatctcgtggattgcatcgtcgaggaggggcaagatgataccgcgtga
DBGET
integrated database retrieval system
