Sinorhizobium medicae: Smed_5354
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Entry
Smed_5354 CDS
T00555
Name
(GenBank) aldehyde oxidase and xanthine dehydrogenase molybdopterin binding
KO
K11177
xanthine dehydrogenase YagR molybdenum-binding subunit [EC:
1.17.1.4
]
Organism
smd
Sinorhizobium medicae
Pathway
smd00230
Purine metabolism
smd01100
Metabolic pathways
smd01120
Microbial metabolism in diverse environments
smd01232
Nucleotide metabolism
Module
smd_M00958
Adenine ribonucleotide degradation, AMP => Urate
smd_M00959
Guanine ribonucleotide degradation, GMP => Urate
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
Smed_5354
Enzymes [BR:
smd01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.4 xanthine dehydrogenase
Smed_5354
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GFIT
Motif
Pfam:
MoCoBD_1
MoCoBD_2
Ald_Xan_dh_C
DUF1289
Motif
Other DBs
NCBI-ProteinID:
ABR64126
UniProt:
A6UKE6
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All DBs
Position
pSMED02:complement(317774..319972)
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AA seq
732 aa
AA seq
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MRFDTPATTNPIDQGKVVGKPIHRIDGPLKTTGKAVYAYEWHDRNTRYAYGYVVGSAIAK
GRIRSMDTAAAKKAPGVIAVVTTEAVGELKKGKYNTAKLFGGMEIQHYHQAIAVVVAETF
EEARAAAALVKVDYAEEKGAFDLAAAKDRAVEPEGGGASGAGDFDAGFEAAPVKLDQIYT
TPDQSHAMMEPHASIAAWNGDDLTVWTSSQMIDWWRTDLATTLGIDKEKVHIMSPFVGGG
FGVKLFLRADAVLAALSAREAGRPVKVALPRPFLMNNTTHRPATIQRIRIGAGRDGKITA
IGHESWSGDLPGGGPEVAVQQTRLLYAGENRMTAMRLATLDLPEGNAMRAPGEAPGMMAL
EIAIDEMAEKLGLDPVEFRIINDTQVDPENPERPFSHRNLIGCLRTGAERFGWRERSKKA
GARREGDWLVGMGVAAAFRNNLVLPSAARIRLDREGIVTVETDMTDIGTGSYTIIAQTAA
EMLGVPIEKVAVSLGDSRFPVSSGSGGQFGGNCSTAGVYAACVKLREAVAQKLSFNSAED
LIFAESEVRSGDRRMPLAQAVADEALVAEDRIEFGDLTKTHQQSTFGAHFVEVGVDVATG
ETRIRRMLAVCAAGRILNPITARSQVIGAMTMGVGGALSEELVVDKERGFFVNHDLAAYE
VPVHADIPHQDVVFLDETDPMSSPMKAKGVAELGICGVAAAVANAIYNATAIRVRNYPIT
LDKLIKELPEIS
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgagattcgacacaccagccacgacgaacccgatcgaccagggcaaggtcgtcggcaag
cccatccaccgcatcgacggtccgctcaagaccaccggcaaagccgtctatgcctatgag
tggcacgatcggaatacccgctatgcctatggctatgtggtcggctcggcaatcgccaag
ggccggatcaggtccatggataccgccgccgcgaagaaggccccgggcgtgatcgcggtc
gtaacgacagaagcggtgggggaactgaagaaaggaaaatacaacacggccaagctcttc
ggcggcatggagattcagcactatcaccaggcgatcgccgtcgtggtcgcggaaacattc
gaggaggctcgcgcggccgccgcgctggtcaaggtcgattatgccgaggaaaagggcgca
ttcgacctggcggcggcaaaggaccgcgccgtcgagccggaaggagggggtgcctccgga
gcgggcgacttcgatgccggcttcgaggcagcgcccgttaagctcgaccagatctatacg
accccggatcagtcgcatgcgatgatggagccgcacgcctccatcgccgcctggaatggc
gatgacctgactgtctggacgtcgagccagatgatcgactggtggcggaccgatctcgcg
acgacgctcggaatcgacaaggagaaagtccatatcatgtcgcccttcgtgggcggtggt
ttcggagtcaagctgttcctgcgagcagatgcggtgcttgccgcgctctccgcccgcgaa
gccgggcgccccgtgaaggtcgccctgccccgccccttcctgatgaacaacacgacgcac
cggccggcgacgatccagagaatccgcattggcgcaggtcgcgatggcaaaatcactgcg
atcggtcatgaaagctggtccggggacctcccgggcggaggacccgaagtggccgttcag
cagacgcggctgctttacgccggcgagaaccggatgacggccatgcggcttgcaacactc
gatcttcccgaaggaaatgcgatgcgcgcaccgggcgaagccccgggcatgatggcgctg
gagatcgcgatcgacgagatggccgaaaagctcggtctcgatcccgtcgaattccgtatc
atcaacgatactcaggtcgatccggagaatccggaaagacctttttcgcaccgcaatctc
atcggttgcctgcgcaccggagcggagcgcttcggctggcgggaacggagcaagaaagcc
ggggctcgtcgggaaggagactggcttgtcggtatgggagtggccgccgcgttccgcaac
aatcttgtgctgccctcggcagcccgcatccggctcgaccgcgagggcatcgtcacggtc
gaaaccgacatgaccgatatcggcacgggcagctacacgattatcgcccagaccgctgca
gaaatgctaggcgttccgatcgaaaaggtcgccgtcagcctgggagactcgcgcttcccg
gtctcctcgggttcgggcgggcagttcggggggaactgctccacggcaggcgtatacgcc
gcttgcgtcaagctacgcgaagcagtggcgcaaaagctaagcttcaacagcgccgaagat
ctcatcttcgcagagagtgaagtccgatcaggagatcgccgcatgccgctggcgcaggcc
gtagccgatgaggcgctcgtggcggaggaccggatcgagttcggcgatctcaccaaaacc
catcagcagtccaccttcggcgcgcattttgtcgaggtcggcgtggacgtagcgacagga
gagacccggatccggcggatgctggcagtctgcgccgccggccggatcctcaatccaatt
actgcgcgcagtcaggtgatcggcgcgatgacgatgggcgttggcggtgccttgtcggag
gagctggtcgtcgataaggagcgcggcttcttcgtcaaccacgaccttgccgcttacgaa
gtgccagtccacgccgatataccgcaccaggacgttgtcttcctcgacgagaccgatccg
atgtcctcgccgatgaaggcgaagggcgtcgcggagctcggcatctgcggtgtcgccgca
gctgtagcgaacgccatctataacgcgaccgccataagggtgagaaattatccaatcacg
ctcgacaagctgatcaaagagcttccggaaatcagttag
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