Sinorhizobium medicae: Smed_5367
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Entry
Smed_5367 CDS
T00555
Name
(GenBank) Peptidoglycan glycosyltransferase
KO
K03587
cell division protein FtsI (penicillin-binding protein 3) [EC:
3.4.16.4
]
Organism
smd
Sinorhizobium medicae
Pathway
smd00550
Peptidoglycan biosynthesis
smd01100
Metabolic pathways
smd01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Smed_5367
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Smed_5367
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
smd01011
]
Smed_5367
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smd03036
]
Smed_5367
Enzymes [BR:
smd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Smed_5367
Peptidoglycan biosynthesis and degradation proteins [BR:
smd01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
Smed_5367
Chromosome and associated proteins [BR:
smd03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Smed_5367
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Beta-lactamase
AntA
Motif
Other DBs
NCBI-ProteinID:
ABR64138
UniProt:
A6UKF8
LinkDB
All DBs
Position
pSMED02:complement(333016..334749)
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AA seq
577 aa
AA seq
DB search
MRKHAFTLRSRAHSRRVRIICIMAAFAAIFTGIFLRLVQFGMEQEASHGISITYDRAPGG
RPAIVDRNGELLATDIPIASLFIEPRSIPDLDEAVEKLTGIFPELDARELHSRLRSKDAF
TWIKRQITPDKQQAVIDSGLAAIGFRPENRRLYPNGSLAAHILGAVDIDNRGIAGIEKWI
DANWLADLRGAGLELKGRELQRIELSIDLRVQYALEQELGKAITKFGAAAGAGLLLDVTN
GEVLALASYPDFDPNNPENAFKPDRINRVTAGVFEMGSTFKALTTAMALESGRFNLESVV
DASKPLNFGRMRIHDYRGKYRPLTIPEAFVHSSNIVMAKMALALGPEASRTFLGRFGALS
PLATELPESAAPLLPSSWSEVATATVSFGHGIAVTPLQASTAVAALANGGRLIRPTFIKD
SPVSERTIAEDLVSSDTSEAIRHLLRLNTAVGSATRANVPGYAIGGKTGTAEKVVGGRYS
RELNVTSFMGIVPADNPRYLLLTLLDEPRGLPETYGNRTSGWNAVPFGGAVFQRILPMLV
APTFPPPAGTVQAVPAATEEPGSRGTAAARTWLLRPR
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagcacgccttcacccttcggagcagggcacacagcagacgggtgcgcatcatc
tgcatcatggcagcgtttgctgccatattcaccggtatttttctgcgactcgtccagttt
ggaatggagcaggaagcgagccacgggatcagcatcacctatgaccgggctccaggtggc
cggcccgcaatcgtcgatagaaacggggagctgctcgcgaccgatatacccatcgcgtcg
ctctttatcgagccgcggtcgatcccagacctggacgaggcggttgaaaaactcaccggg
attttccccgaactcgatgcccgggagctccattcgcgcctgcgtagcaaagacgccttc
acctggatcaagcggcagataactccggacaagcagcaggcggtcatcgattccggattg
gcagcgatcggctttcgccccgaaaaccgacggctctatccgaacggctcattggctgcc
catatccttggcgccgtggacatcgacaatcggggcattgcgggtattgaaaagtggatt
gatgcaaactggctcgcggacctgcgcggtgccgggctggaactcaagggacgtgaactc
caacggatcgagctgtcgatcgacctgcgcgtccaatacgcactggagcaggagctcggc
aaggccatcacgaaattcggggctgccgcgggtgccgggctcctgctcgacgtcaccaat
ggcgaagttctcgcgctcgcctcctatccggacttcgatccgaacaatccggagaatgca
ttcaagccagaccgaataaaccgcgttactgctggcgtcttcgagatgggatcgaccttc
aaggctctgacgacggcaatggctctggaatcgggccggtttaatctcgaatcggtggtg
gatgcgagcaagcctttgaatttcgggaggatgcgcatccatgattatcgcggcaagtac
agaccgctgaccattcccgaagcattcgtgcactcctccaatatcgtcatggcgaaaatg
gcgttggccctcggaccggaagcgtcgaggacattcctcggacgcttcggagccctgtcg
ccgcttgcaaccgaactgccggagagcgccgcaccgctgctgccatcctcgtggagtgag
gtggcgacggcaacggtctcattcggccatgggattgccgttacgccgctgcaggccagc
actgcggtggccgctctggcgaacggcggcaggctgatcaggcccactttcataaaggac
agccccgtttccgaacggacgatagcggaggatctcgtgtcgtcggacaccagcgaggca
attcgccatcttttgcgcctcaacaccgctgtcgggtctgcaacgagagccaatgttccc
ggttacgcaatcggcggcaagaccggcacagccgagaaagtggtcgggggccgctattcc
agggagctcaacgtcacatctttcatgggtatcgtaccggcggacaatcccagatacctg
ctgctcacccttttggacgagccccgcggactgcccgagacatatggcaaccgaacctcg
ggctggaatgcggtgccgttcggcggcgccgtattccagcgcatcctcccaatgctcgtt
gcgcccacctttccgccgcccgcgggcactgtccaagcggttcccgccgcgaccgaagaa
cccggttcgcgagggacggcagccgcacgaacctggctgctccggcccagataa
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