KEGG   Sinorhizobium medicae: Smed_5376
Entry
Smed_5376         CDS       T00555                                 
Name
(GenBank) P-type conjugative transfer ATPase TrbB
  KO
K20527  type IV secretion system protein TrbB [EC:7.4.2.8]
Organism
smd  Sinorhizobium medicae
Pathway
smd02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:smd00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Smed_5376
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:smd02044]
    Smed_5376
Enzymes [BR:smd01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     Smed_5376
Secretion system [BR:smd02044]
 Type IV secretion system
  Trb secretion system protein
   Smed_5376
SSDB
Motif
Pfam: T2SSE ResIII AAA_16 AAA_19 nSTAND3 DEAD Sigma54_activat Zeta_toxin NACHT NPHP3_N TrwB_AAD_bind AAA_22 AAA_29 nSTAND_NTPase5 AAA_30 cobW IstB_IS21 FtsK_SpoIIIE RsgA_GTPase AAA_7 DUF87 PhoH ABC_tran AAA_28 NTPase_1 AAA_11 AAA Mg_chelatase SLFN-g3_helicase TsaE AAA_23 NB-ARC RNA_helicase Bac_DnaA KAP_NTPase
Other DBs
NCBI-ProteinID: ABR64145
UniProt: A6UKG5
LinkDB
Position
pSMED02:342561..343538
AA seq 325 aa
MTQLRSHPRLVRKLQEALGDQLCVALDDASVVEIMLNPDGKLFIDRLGDGVALAGEMSSA
AAEIVVGTVAHALQSEVDREQPIISGELPIGGHRFEGLLPPVVARPAFAIRRRASRLIPL
EDYVRTGVMTEDQVSTIRSAISSRLNIIISGGTGSGKTTLANAVIDEIVKTRPDDRLVIL
EDTAEIQCAAQNAVLLHTSDKVDMARLLKSTLRLRPDRIVVGEVRDGAALTLLKAWNTGH
PGGAATIHSNTAMSALRRLEQLTAEVSQQPMHEVIGEAVDLIVSIERTPRGRRVRDVIRV
ERFAGGEYEIESDQLTEEQEARHVA
NT seq 978 nt   +upstreamnt  +downstreamnt
gtgacccagcttcgttctcacccccgactcgtccgcaagcttcaggaggcactcggcgat
cagctctgcgtcgccctggatgacgcgagtgtcgttgagatcatgctcaatccagacgga
aagttgttcatcgaccggttgggcgacggtgttgcgcttgccggggaaatgtcatcagct
gctgctgaaattgttgtcggtacagtggcgcatgcgctccaatccgaggtcgacagggaa
cagccgatcatctccggtgagttgccgatcggtggtcaccgtttcgaggggctccttccc
ccggtcgtggcaaggcctgcctttgcgattcggcgccgcgcctcacgcctcatccccctc
gaagactatgtccgcaccggggtgatgaccgaagatcaagtctcgactatccgaagtgca
atttcctcgaggctcaacatcatcatctccggagggaccggttccggcaagacgacgctt
gcaaatgctgtcatcgacgagatcgtcaaaaccaggccggatgatcgcctcgtgattctt
gaagataccgcggaaattcagtgcgcggcccagaacgccgttcttctacataccagtgat
aaggtcgacatggcgcggctccttaagagcaccctgcgcttgcgtcccgacaggatcgtc
gtgggcgaagtgcgcgacggcgcggccctaacgctactcaaggcctggaacaccggtcat
cccggtggggcggctacgattcactccaacaccgccatgtcggcgctccgccgtcttgaa
cagctgacggccgaggtaagccagcagccaatgcacgaggttattggagaagccgtcgat
ctgattgtttcgatcgagcgcacgccccgcgggcgacgcgttcgcgacgtcatccgcgtc
gagcgtttcgccggcggcgagtatgagatcgaatccgatcagctcacggaagaacaggag
gcgcgccatgttgcataa

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