Sinorhizobium medicae: Smed_5471
Help
Entry
Smed_5471 CDS
T00555
Name
(GenBank) binding-protein-dependent transport systems inner membrane component
KO
K02053
putative spermidine/putrescine transport system permease protein
K02054
putative spermidine/putrescine transport system permease protein
Organism
smd
Sinorhizobium medicae
Pathway
smd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Smed_5471
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smd02000
]
Smed_5471
Transporters [BR:
smd02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Smed_5471
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
ABR64231
UniProt:
A6UKQ1
LinkDB
All DBs
Position
pSMED02:439329..441095
Genome browser
AA seq
588 aa
AA seq
DB search
MRSSSVSSSPPMPAWIGHAAKIAPLMVLLLAFLVYPVGQLLSLSFLGEDGFSLAFYKQLF
ASSLYLNVLWITLKISLATTALAVILGYPVAYLISTSGHGTKSLLVFLVLLSFWTSFLVR
AFAWVVILGRNGVINHTLLSVGVIDRPANLLYGTGAVLVGMVHAMLPLAVMTMLAVMENI
DRNLPRAASTLGARPGSAFWTVYFPLSMPGVAAAAIMVFVTAIGFFIVPALLGGRFETMI
SQLIIDQVQQTLNWGLAGAIAVLLLVVVMAVFIVYDRVFGFATLTGESGANVTSRDSATR
RAGAKFLAMLGEATDRLLAIMPGNGQSTDAERAPLLLRLFVWSILVLISIPAVLMVPISF
SQAGLNWPPTGFTTQWYSQMWANPVWSQALLRSLTVALGAGVLSMLVGVPAAFLLARADI
RGKAAILAFVLSPIVVPRIIIAVGMFYVFARLGLVGSALGLIIGHTVVCVPYVVLTLVAV
LRNYDTRLDLAAYSLGATPLKALIRVTFPILGAGMFSAFLFAFATSFDELTIALFSSGGL
NATLPKQFWDEVTLQVSPVIAAVSTCLLVFVSVLIFAADRLRQRSVAR
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcgtcatcagtttcctcatcccccccgatgcccgcgtggattggacacgctgcg
aaaatcgcgcctctgatggtgcttctgctggcgttcctggtctatccggtcggacaattg
ctgtcactgagcttcctcggcgaggacggattctcgttggccttctacaagcagctcttt
gcgtcatcgctttatctcaacgttctctggatcaccctgaagatttcgctggcgaccacc
gctcttgccgtgatcttgggctatcccgtcgcctatctcatctcgacttcgggccacggg
acaaaaagccttctggtctttctcgtgcttctgtcgttctggaccagctttctcgtgcga
gcattcgcgtgggtggtgatcctcgggcgcaacggcgtgatcaaccacacgctgctgtcg
gtcggcgtcatcgatcggccggccaaccttctctatgggacaggcgcggttctcgtcggt
atggtccacgccatgctaccgctggcggtgatgaccatgcttgccgtgatggaaaatatt
gaccggaacctgccgcgcgcggcttccaccctgggtgctcgcccgggctcggcattctgg
accgtgtattttccgctctccatgccgggcgtcgccgccgccgccatcatggtgttcgtg
accgccatcggcttctttatcgtgccggccctgcttggcggacgtttcgaaacgatgatc
tcgcagcttatcatcgatcaggtccagcaaacgctgaactgggggcttgccggtgcgatc
gcggtgcttcttctcgtcgtcgtcatggcagtcttcatcgtctacgaccgggtattcggc
tttgcgacccttaccggcgaaagtggagccaatgtcacgagccgcgacagcgcgacccgc
cgagccggcgccaagtttcttgctatgcttggcgaagcgaccgacaggcttctggcgatc
atgccaggcaacgggcagagcacggatgcggagcgtgcgccattgctgctcaggctcttc
gtctggtcaatcctggtgcttatcagcattccggccgtcctgatggttccgatctcgttc
agtcaggcgggattgaactggccgcctacgggctttaccactcagtggtattcgcagatg
tgggcgaaccctgtctggtcgcaggccctgttgagatcgctgaccgttgcgctgggtgcg
ggtgttttgtccatgttggtcggcgtcccggccgcgttcctgctggcacgcgctgacatc
cggggcaaggcggcgattctcgctttcgttctgtctccgatcgtcgtcccgcgtatcatc
atcgcagtcggcatgttctatgtctttgcgaggttgggcctcgttggaagcgcgctcggg
ctcattatcggtcacactgtcgtctgtgtcccctatgtcgtcctgacactggtcgcggtt
ctgcgcaactacgacacgcgattggatctcgccgcctacagcctcggcgcgaccccgctc
aaggcgctgatccgcgtgactttcccgatcttgggggcggggatgttctctgcgttcctg
tttgccttcgcgacttcgttcgatgaactcaccatcgccctgttttcgtccggcggcctc
aacgccacgctgccgaagcagttctgggacgaagtgacgttgcaagtctcgcctgtgatc
gcggctgtctctacctgcctcctggtcttcgtctcggtgctgatcttcgccgcggaccgg
ctgcggcagcgcagcgtggcacgctga
DBGET
integrated database retrieval system
