Sinorhizobium medicae: Smed_5583
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Entry
Smed_5583 CDS
T00555
Name
(GenBank) Alpha-N-arabinofuranosidase
KO
K01209
alpha-L-arabinofuranosidase [EC:
3.2.1.55
]
Organism
smd
Sinorhizobium medicae
Pathway
smd00520
Amino sugar and nucleotide sugar metabolism
smd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
Smed_5583
Enzymes [BR:
smd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.55 non-reducing end alpha-L-arabinofuranosidase
Smed_5583
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-L-AF_C
ASD1_dom
Glyco_hydro_39
Motif
Other DBs
NCBI-ProteinID:
ABR64329
UniProt:
A6UKZ9
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Position
pSMED02:complement(550099..551607)
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AA seq
502 aa
AA seq
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MEARVTAHSRYTIADIDKRLYGSFLEHLGRAVYTGIYEPGHPTALPNGMRKDVIDLVREL
DTPICRYPGGNFVSAYNWEDGIGPKEGRPTRLDLAWRTSESNQVGIHEFAEWAEAAGTEM
MLAVNLGSRGLDAARNFVEYVNHPGGSQWSDLRRQNGRAEPWNVKLWCLGNEMDGPWQVG
HKSAAEYGHLANETAKAIRAFDDKLELVVCGSSHSDMATYPRWEATVLDATYDQVDYISL
HMYFENYEKRTSEFLALPEKLDRYIGTVSGVIDFVKGSKRSNRDVKISFDEWNVWYHERK
NDAKRMREWNWPHAPVLLEDIYNFEDVLQVGCIINTFIRRSDVVRVACIAQLVNVIAPIM
TEPGGSSWRQTIYHPLHLASRYGRGTALQLDVDCATYVSNVSEAVSYLDIAGVHDADAGT
LTFFAVNRHSSEAASIKLAVERFGTIRGVEHTLIKHDDLEARNTKDNPDNVSPRKTSDAV
MDGNSVSVSVPPYSYSMIRIRL
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
ttggaggctcgggttaccgcgcattcgcgctatacaatcgcggacatagataagcggcta
tacggatcgttcctggagcacttgggtagggctgtctatacaggcatttacgaacctggc
catccgacggcgctccccaacgggatgcgcaaggacgtgatcgatctcgtgcgggaactc
gatacgccgatttgccgctatccaggtggcaatttcgtgtcggcctacaattgggaagac
ggcattgggccgaaagagggccgtccaacgcgccttgatctcgcatggcgcacctcggaa
tctaaccaggtcggtatccatgagttcgccgaatgggctgaggctgctggcaccgaaatg
atgctggcggtcaatctgggctcgcgcggcctggacgccgcacggaacttcgtcgagtac
gtgaaccatcccggcggcagtcagtggtcggacctgcgacgccagaacgggcgcgcggag
ccttggaatgtcaagctgtggtgccttggcaacgaaatggacgggccgtggcaagtgggt
cataaaagcgccgccgagtacggccaccttgcaaacgagaccgcaaaggccatccgcgcc
ttcgacgacaagcttgaacttgtcgtttgcggatcatcccactccgatatggcgacctat
cctcggtgggaggcaacggtcctcgacgcgacatacgaccaggtcgactacatctccctc
cacatgtatttcgagaactacgagaagagaacttcagaatttctcgctcttccggaaaag
ctcgatcgctacatcggcacggtcagtggtgttatcgattttgtgaagggcagcaaacgg
tccaatcgagacgtcaagatttccttcgacgaatggaacgtctggtatcacgagcgcaag
aacgacgccaagcggatgcgagaatggaattggcctcatgcgccggttctcctcgaagac
atatataacttcgaggatgtgctccaggtcgggtgcatcatcaacaccttcatccgccgc
tcggacgtcgtgcgagtcgcctgtatagcgcagctggtcaacgtgatcgcgccgatcatg
accgagccaggcggtagttcctggcgtcagacgatctaccatcccctccatctggcatct
cgctacggtcgaggcaccgcgctgcaactcgacgtcgactgtgcgacttatgtctccaac
gtttccgaagctgtgtcctatctcgatatcgccggcgttcatgacgccgacgcgggcact
ctcaccttctttgcggtcaatcgccactcgtccgaagcggcaagcatcaagctcgccgtg
gagcgtttcggaaccatcaggggcgtcgagcacaccctgatcaagcacgacgatctcgag
gcccggaataccaaggacaatccggacaacgtctcaccgcgcaagacgtccgatgcggtc
atggacggaaacagcgtcagtgtttccgttccgccatactcgtattcgatgatcagaatt
cgactttaa
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