Sinorhizobium medicae: Smed_5989
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Entry
Smed_5989 CDS
T00555
Name
(GenBank) Xylose isomerase domain protein TIM barrel
KO
K03335
inosose dehydratase [EC:
4.2.1.44
]
Organism
smd
Sinorhizobium medicae
Pathway
smd00562
Inositol phosphate metabolism
smd01100
Metabolic pathways
smd01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
Smed_5989
Enzymes [BR:
smd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.44 myo-inosose-2 dehydratase
Smed_5989
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
ABR64664
UniProt:
A6ULY4
LinkDB
All DBs
Position
pSMED02:946380..947318
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AA seq
312 aa
AA seq
DB search
MVIHLHRLTPAKVWLGVIPTLWWNDDFINIDIGIPYEQALSEMALAGYVGCGVGHKFPTD
PKILRPALELRGLRISEPWVSTYFTIKAMKRHTLDNVDAQLDFLEAMEGGSDDPRRADLV
VSEFGRAVNPLPVALFPNCPDFSEDEWKYLIEGLHEAGDKARARKRRLCYHPHLGTGVMK
AEAIHRLMDETEPGLVNMLLDTAHQAAAGVDPLALATKYADRIKHVHLKDIRAEVVDEIH
HRELSFQQGIEAGIFTVPGDGSIQTFPEILGALAAANFAGWICVEAEQDPAKANPLQYAK
MGREYLREVLGW
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggtgatacatctgcatcgactgacgcccgccaaggtctggttgggtgtcatccccacg
ctctggtggaatgacgatttcatcaacatcgatatcggcatcccctacgagcaggccctg
agtgaaatggcgctcgccggctatgtcgggtgtggggtcggccataaatttccgacggat
ccgaaaatactgcgacctgccctcgaactcaggggattgcggatttcggagccttgggtg
agcacttacttcaccatcaaggcgatgaagcgtcatacgctggacaacgtggatgctcag
ctcgacttcctcgaagccatggaaggtggcagcgacgatccgcgcagggccgatctggtc
gtctccgagtttggccgcgctgtcaatccgcttccggtcgccctgtttccgaattgcccc
gatttctccgaggacgagtggaaatacctgatcgaaggcttgcatgaggcgggagacaaa
gccagggcccgtaagcgccggctctgctatcacccgcatctcggaaccggagtgatgaag
gcggaagcgatccaccggctcatggatgagacggaacctggcttggtcaacatgcttctc
gatacggcgcaccaggcggccgccggtgtcgatccgctggcgctggccactaaatacgct
gaccgcatcaaacatgttcacttgaaagacattcgcgccgaggtggtcgacgagattcac
cacagggaattgtccttccagcaaggcatcgaggcagggatctttaccgtcccgggtgat
ggctccatccagacctttccggagattcttggtgcgttggccgcggccaatttcgccggt
tggatctgcgtcgaagcagagcaggacccggccaaggccaatccgctgcaatacgcgaaa
atgggccgcgaatacctgcgcgaggtgctcggatggtag
DBGET
integrated database retrieval system
