Sinorhizobium medicae: Smed_6084
Help
Entry
Smed_6084 CDS
T00555
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
smd
Sinorhizobium medicae
Pathway
smd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Smed_6084
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smd03019
]
Smed_6084
03110 Chaperones and folding catalysts [BR:
smd03110
]
Smed_6084
03029 Mitochondrial biogenesis [BR:
smd03029
]
Smed_6084
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smd04147
]
Smed_6084
Enzymes [BR:
smd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Smed_6084
Messenger RNA biogenesis [BR:
smd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Smed_6084
Chaperones and folding catalysts [BR:
smd03110
]
Heat shock proteins
HSP60 / Chaperonin
Smed_6084
Mitochondrial biogenesis [BR:
smd03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Smed_6084
Exosome [BR:
smd04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Smed_6084
Exosomal proteins of other body fluids (saliva and urine)
Smed_6084
Exosomal proteins of breast cancer cells
Smed_6084
Exosomal proteins of colorectal cancer cells
Smed_6084
Exosomal proteins of bladder cancer cells
Smed_6084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ABR64728
UniProt:
A6UM48
LinkDB
All DBs
Position
pSMED02:1017063..1018700
Genome browser
AA seq
545 aa
AA seq
DB search
MAAKEVKFGRSAREKMLRGVDILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVTVAKEI
ELEDKFENMGAQMVREVASKTNDIAGDGTTTATVLAQAIVREGAKAVAAGMNPMDLKRGI
DLAVAEVVKDLLAKAKTINTSDEVAQVGTISANGEKQIGLDIAEAMQKVGNEGVITVEEA
KTAETELEVVDGMQFDRGYLSPYFVTNPEKMVADLEDAYILLHEKKLSNLQAMLPVLEAV
VQTGKPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTGGTV
ISEDLGIKLESVTLDMLGRAKKVSITKENTTIVDGAGQKSDIEGRVAQIKAQIEETTSDY
DREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRIDDALNATRAAVQEGIVPGGGVALL
RSSVKITVKGENDDQDAGVNIVRRALQSPARQIVENAGDEASIVVGKILEKDTDDFGYNA
QTGEYGDMIAMGIIDPVKVVRTALQDAASVASLLITTEAMIAELPKKDAPAMPGGMGGMG
GMDMM
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagaagtcaagttcggccgtagcgcgcgcgaaaagatgctgcgcggcgtc
gacatcctcgccgacgcagtcaaggtgacgctcggcccgaagggccgcaacgtcgtcatc
gacaagtcgttcggcgcgccgcgcatcaccaaggacggcgtcaccgtggccaaggagatc
gaactcgaagacaagttcgagaacatgggcgcccagatggtccgcgaagtcgcttcgaag
accaacgacattgccggtgacggcacgacgactgcaaccgttctcgctcaggcaatcgtt
cgcgaaggcgcgaaggccgttgccgccggcatgaacccgatggaccttaagcgcggtatc
gacctcgccgtcgcggaagtcgtcaaggacctgctcgccaaggccaagacgatcaacacc
tcggacgaagtcgcccaggtcggcacgatctcggcaaacggcgaaaagcagatcggtctc
gacattgcggaagcgatgcagaaggtcggcaacgaaggcgtcatcacggttgaagaagcc
aagaccgccgagaccgagctcgaagtcgtcgacggcatgcagttcgaccgcggctacctg
tcgccctacttcgtcaccaacccggaaaagatggtcgccgacctcgaagacgcttacatt
ctcctgcacgagaagaagctgtcgaacctgcaggcgatgctcccggttctcgaagccgtc
gtccagaccggcaagccgctcctcatcattgctgaagacgtcgaaggcgaagcactcgca
acgctcgtcgtcaacaagctgcgtggcggcctgaagatcgctgccgtcaaggccccgggc
ttcggcgaccgccgcaaggccatgctcgaagacatcgccatcctgacgggcggcacggtg
atctcggaagacctcggcatcaagctcgaaagcgtcacgctcgacatgctcggccgtgcg
aagaaggtttcgatcaccaaggaaaatacgacgatcgtcgacggtgccggccagaagtcc
gacatcgaaggccgcgtcgcccagatcaaggcccagatcgaagaaaccacttccgactac
gaccgtgagaagctgcaggagcgccttgccaagctcgctggcggcgttgccgtcatccgc
gtcggcggtgcgacggaagtcgaagtgaaggaaaagaaggaccgcatcgacgacgctctc
aacgcgacgcgcgctgcagttcaggaaggcatcgtaccgggcggcggcgttgctctgctg
cgttcctccgtcaagatcaccgtcaagggtgaaaacgacgaccaggatgccggcgtcaac
atcgttcgccgcgctctgcagtctccggcccgccagatcgtcgaaaacgctggcgacgaa
gcatccatcgtcgtcggcaagatcctcgagaaggacaccgacgacttcggttacaacgca
cagaccggcgaatatggcgacatgatcgccatgggcatcatcgacccggtcaaggtcgtt
cgcaccgcgctccaggacgcagcctcggttgcttcgctgctcatcaccaccgaagccatg
atcgccgagctgccgaagaaggacgctccggcaatgcctggcggcatgggcggcatgggc
ggcatggacatgatgtga
DBGET
integrated database retrieval system
