Sinorhizobium medicae: Smed_6106
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Entry
Smed_6106 CDS
T00555
Name
(GenBank) protein of unknown function DUF181
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
smd
Sinorhizobium medicae
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smd03009
]
Smed_6106
Ribosome biogenesis [BR:
smd03009
]
Prokaryotic type
ribosomal protein modification factors
Smed_6106
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO
Motif
Other DBs
NCBI-ProteinID:
ABR64745
UniProt:
A6UM65
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All DBs
Position
pSMED02:complement(1038167..1039384)
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AA seq
405 aa
AA seq
DB search
MNAVEEYAQGTQRTYNPEETLRRIAPAMRTCGISRVLDVTHLDRIGIPTYNAVRPNGMIL
SVSNGKGWTKAAASVSAIMESIEVEHAEYPDTSAWHLAQSAKVLRNRGYSVVDAPTLISE
CLWPSDTYGGLYYSDDLRLDWVEGREIIESRPVLLPASTIYVRAPYVHYFTSNGLASGNT
WEEATLHGICELIERDSTARLLGRPEGMTTSRLLRIEPKSMPEHLGHFSEKVAQAGIELF
MFALPSAIDIHTFWAVFHCPGEPSFMLATSAGFGCHTSPQIAASRALTEAAQSRLTYIHG
AREDLGIDHVNRPLTCAETEARLALQARTFAKFRQIPTVTWDELLAVAPHRARGRTIPES
LSMVLRMLKEAGHGQVYVHDLTKRGLDLAVTKAFVPGLKVSAKMI
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctgttgaggaatacgcacaaggaacccagcgcacctataatccggaagagaca
ttgcggagaattgcgccagcgatgcgcacctgcggcatcagccgcgttctcgacgtcacc
catctcgatcgaatcggcatccccacctacaatgccgtgcgccccaatggaatgatcttg
tccgtgtccaatgggaaagggtggacgaaggccgccgcatccgtatccgcaatcatggag
tcgatcgaggtcgagcacgccgaatatccggatacctcggcctggcatctggctcaaagc
gcgaaggtactgcgaaaccggggatattcggtcgtcgatgcgccaacgctcatcagcgag
tgcctctggccctccgatacctatggcggtctctactactcagatgatcttcgcctcgat
tgggtcgagggacgcgagatcatcgagtctcggccagtcctgctgccggccagcaccatc
tatgtacgcgcgccttacgtgcattatttcaccagcaatggattggcgagcggcaacacc
tgggaagaagcaacgcttcacggcatctgcgagttgatcgaacgcgattccacggcgcgt
ctcctcggtcgtcccgagggcatgaccacatcacggttgcttcggatcgagccaaaatcg
atgcctgaacatcttgggcacttctcggagaaagtggcgcaggccggaatagagcttttc
atgttcgctcttccgagcgccatcgatatccatacattctgggctgtgttccattgcccg
ggcgagcccagtttcatgctggccacctcggcgggcttcgggtgccatacatcgccgcag
atcgccgcgtctcgcgccctgaccgaagctgcccagtcgcgcctgacctatattcacggg
gcgcgggaggatctggggatagaccacgtcaatcgtccactgacctgcgcggagacagaa
gcgcgattggccttgcaggcgcggacatttgccaagtttaggcagatcccgaccgtcacc
tgggatgaacttctggccgtggcgccacatcgtgcccgcgggcgtacgatcccggaaagc
ctctccatggtgctgagaatgttgaaggaggccggacacggtcaggtctatgtccacgat
ctgacgaagcgcggtctagacctggccgtgacgaaggccttcgtgccggggctcaaggtc
agcgcgaagatgatttga
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