KEGG   Sinorhizobium medicae: Smed_6162
Entry
Smed_6162         CDS       T00555                                 
Name
(GenBank) Lytic transglycosylase catalytic
  KO
K03194  type IV secretion system protein VirB1
Organism
smd  Sinorhizobium medicae
Pathway
smd03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:smd00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Smed_6162
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:smd02044]
    Smed_6162
Secretion system [BR:smd02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   Smed_6162
SSDB
Motif
Pfam: SLT
Other DBs
NCBI-ProteinID: ABR64788
UniProt: A6UMA8
LinkDB
Position
pSMED02:complement(1086273..1086980)
AA seq 235 aa
MLNAALPLAVAILASMCVSSNAAPISLREFERLARGCAPQVNPSTLAAIAKVESGFDPLA
AHDNTTGESLHWNDQTQARQSVRARLEAQHSIDVGLMQINSKNFSVLNLTIEKAFQPCIS
LVAAAHLLESRYAGGDTAAEKQLALRQAISAYNTGDLTRGFANGYVQKVESAAREIVPPL
VGCPEKADEKPISEKIWDVWGSLEPDLSAGDLISLPALQKPGDHEHLEKQHIIFD
NT seq 708 nt   +upstreamnt  +downstreamnt
atgttaaacgcagctttgcccttggctgtcgccatcttggcctcgatgtgcgtatcgagc
aacgccgcgccaatctccttgcgtgagttcgagcgccttgcacgcggatgcgcgccgcag
gtaaatccgtctacgcttgccgcaatcgccaaggttgaaagcggctttgatccgcttgcg
gcacatgacaacaccaccggagagagccttcactggaacgatcaaacgcaagcgcgccag
agcgtcagagcccgcctcgaggcacaacattcaatcgacgttgggcttatgcagatcaac
agtaagaacttttccgtcctcaatctcacgatagaaaaggcctttcagccctgtatttca
cttgtggccgcggcgcacttgcttgaaagccgctatgccggcggcgacactgccgcagaa
aagcagttggcgcttcgccaggcaatctcggcctacaacacgggtgacctgacgcgcgga
tttgcgaacggttatgtgcagaaggttgagtcagccgctcgagagatcgtgccaccgctg
gtcggatgtccggaaaaggctgatgaaaagccgatctcggaaaaaatatgggatgtgtgg
ggttcgttagagccagacttatcggcaggcgatctcatcagcctccccgcactccagaag
cctggagaccatgaacatctcgaaaaacaacatattatattcgattaa

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