Sinorhizobium medicae: Smed_6248
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Entry
Smed_6248 CDS
T00555
Name
(GenBank) binding-protein-dependent transport systems inner membrane component
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
smd
Sinorhizobium medicae
Pathway
smd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Smed_6248
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smd02000
]
Smed_6248
Transporters [BR:
smd02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Smed_6248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
ABR64847
UniProt:
A6UMG7
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All DBs
Position
pSMED02:complement(1168635..1169510)
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AA seq
291 aa
AA seq
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MVSQTETGSGRPNSPAQVRRLTDFDLTLPALGLLILFFVMPVAMLLTRSVTEPVPGLGNY
AELLGSSTYLRIFANTFIVSSLVTLVSLLIGFPVAWALAIMPSRAASIVFAILLLSMWTN
LLARTYAWMVLLQRTGVINKMLLGMGLIDTPLPLVNNLTGVTIGMTYIMLPFIILPLYGV
IRKIDPAILQAAALCGANRWQSLVRVLLPLAMPGMAAGALMVFVMSLGYFVTPALLGGTS
NMMLAELIAQFVQSLVNWGMGGAAALVLLVVTLALYAVQLRFFGTNRMGGR
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggtatcgcagaccgaaaccgggagtgggagaccgaattcgcctgcacaggtccggcgg
ctgaccgactttgacctgacattgccagccctagggctgctgatcctgttcttcgtcatg
ccggtcgccatgctgttaacgcgtagcgtcacagagccggtgccgggtctcggcaactat
gccgaattgctgggctcatcaacctacctgcgaatattcgcaaacaccttcatcgtttct
agcctcgtcacacttgtatcgttgctgatcggctttcctgtcgcctgggcactggccatc
atgcctagccgcgcggcatccattgtgttcgccattctgcttctatccatgtggacgaac
cttcttgcgcgtacttacgcgtggatggtgttgcttcagcgcacaggtgtcatcaacaag
atgctgcttggaatggggctcatcgatacgccgcttccgctcgtcaacaatctgacggga
gtgacgatcggcatgacctacatcatgttgcccttcatcatcctgccgctctatggcgtc
atccggaagatcgatcctgccatcctgcaggcggctgctctttgtggcgccaatcgctgg
cagtcgctcgtgcgcgtgctgctgccgctcgcaatgccgggcatggcggcaggtgcgctt
atggtcttcgtgatgtcgctcggctacttcgttacgccggcgctgctcggcggtacttcg
aacatgatgctcgcggagctcatcgcacagttcgtccagtctctcgtcaactggggcatg
ggcggcgccgcggccctggtgcttctggtcgtcaccctagcgctgtacgccgtgcagctt
cgtttcttcggcacaaaccggatgggagggcgctga
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