Sinorhizobium medicae: Smed_6249
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Entry
Smed_6249 CDS
T00555
Name
(GenBank) extracellular solute-binding protein family 1
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
smd
Sinorhizobium medicae
Pathway
smd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Smed_6249
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smd02000
]
Smed_6249
Transporters [BR:
smd02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Smed_6249
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
ABR64848
UniProt:
A6UMG8
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All DBs
Position
pSMED02:complement(1169603..1170613)
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AA seq
336 aa
AA seq
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MNRIFVLAATAATIATAMPATAADLVFSSWGGTTQDAQKAAWADKFTEKTGINVLQDGPT
DYGKLKAMVEANAVTWDVVDVEGDYAAQAGKKDLLEKLDFSIIDKSKLDPRFVTDYSVGS
FYYSFVIGCNKDAVDACPKTWADLFDAQKFPGMRAFYKWSAPGVIEAALLADGVSPDKLY
PLDLDRAFKKLDTIKSDIIWWSGGAQSQQLLASAEAPFGSVWNGRMTALAQSGINVETSW
EQNITAADALVVPKGSKNKEAAMQFIALATSPEAQADLAKITGYAPINLDSPKMMDPELA
KTLPDAQTASQVNADMNYWAENRDAIGERWYAWQAK
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgaataggatatttgttttggcggccactgccgcgacgattgctacagcgatgccggcg
acggctgccgatctcgtcttttcgagctggggcggcacgacacaggacgcccagaaggct
gcctgggccgataagttcaccgaaaagaccggcattaacgtactgcaggacgggccgacc
gattacggcaagctgaaggctatggtcgaggcgaatgccgtcacctgggacgtcgtcgac
gtcgagggcgattacgccgctcaggccggcaaaaaggacctcctcgagaaactcgacttc
tctatcatcgacaagtccaagctcgatccgcgcttcgtcactgattattcggttggcagc
ttctattattccttcgtcataggttgcaacaaggatgcggtcgatgcctgccctaagacc
tgggcggacctcttcgacgcccagaaattcccagggatgcgcgccttctacaagtggtcc
gcgccgggtgtcatcgaggccgccctgcttgccgacggtgtatcgcccgataaactctat
ccgctcgatctggatcgcgctttcaagaagctcgacacgattaagtccgacatcatctgg
tggtcaggcggcgcgcagtcgcaacagctcctcgcctccgccgaagcgcctttcggtagc
gtctggaacggccgcatgacggcgctcgcgcaaagcggcatcaatgtcgagacttcctgg
gaacagaacatcaccgccgccgacgctctcgtagtccccaagggctcgaagaacaaggaa
gcggcgatgcagttcatagcgctcgccacatcgccagaagctcaggccgaccttgcaaag
atcaccggatacgcgccgatcaacctggattcgcctaagatgatggatccggaattggcg
aagaccctgccggacgcgcagacggcaagccaagtgaatgcggacatgaactactgggcc
gagaatcgcgatgccatcggcgagcgctggtacgcctggcaggcgaagtaa
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